Gene detail information of Glyur001306s00030547 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G17520.1 | 5.00E-122 | root cap 1 (RCP1) |
| NR | XP_004506341.1 | 0 | PREDICTED: maltose excess protein 1, chloroplastic-like [Cicer arietinum] |
| Swissprot | tr|Q9LF50|MEX1_ARATH | 2.00E-168 | Maltose excess protein 1, chloroplastic (Precursor) |
| trEMBL | tr|I1LP25|I1LP25_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G01610.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01306 | 11708 | 16539 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 18.108 |
| SRR1783600 | control | 18.748 |
| SRR1783602 | moderate drought stress | 13.313 |
| SRR1811619 | moderate drought stress | 13.313 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.050 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 17.903 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.525 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.276 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.905 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.755 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 39.745 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 40.478 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.608 |
| SRR2868004 | Drought Stress (root) | 16.263 |
| SRR2967015 | Control (root) | 17.466 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 26.833 |
| SRR9715740 | Leaf | 26.174 |
| SRR9715741 | Leaf | 24.206 |
| SRR9715739 | Root | 12.020 |
| SRR9715742 | Root | 12.228 |
| SRR9715743 | Root | 12.447 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.285 |
| SRR8749028 | MeJA induced 9h | 11.671 |
| SRR8749029 | MeJA induced 9h | 8.119 |
| SRR8749030 | Uninduced | 2.461 |
| SRR8749031 | Uninduced | 0.901 |
| SRR8749032 | Uninduced | 1.550 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 19.360 |
| SRR8400027 | Control - Root | 21.066 |