Gene detail information of Glyur001304s00038570 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G35460.1 | 4.00E-152 | |
| NR | XP_004513459.1 | 0 | PREDICTED: uncharacterized membrane protein C776.05-like [Cicer arietinum] |
| trEMBL | tr|A0A072V798|A0A072V798_MEDTR | 0 | Integral membrane protein {ECO:0000313|EMBL:KEH37506.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01304 | 31661 | 35990 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001304s00038570.1 | PF10998.3 | DUF2838 | 54 | 163 | 3.20E-34 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.299 |
| SRR1783600 | control | 8.447 |
| SRR1783602 | moderate drought stress | 6.408 |
| SRR1811619 | moderate drought stress | 6.301 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.955 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.115 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 15.559 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 15.281 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.967 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.069 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.109 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.106 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 36.206 |
| SRR2868004 | Drought Stress (root) | 24.109 |
| SRR2967015 | Control (root) | 25.784 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.258 |
| SRR9715740 | Leaf | 11.893 |
| SRR9715741 | Leaf | 13.723 |
| SRR9715739 | Root | 8.555 |
| SRR9715742 | Root | 15.491 |
| SRR9715743 | Root | 13.331 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.365 |
| SRR8749028 | MeJA induced 9h | 4.895 |
| SRR8749029 | MeJA induced 9h | 5.617 |
| SRR8749030 | Uninduced | 3.152 |
| SRR8749031 | Uninduced | 1.881 |
| SRR8749032 | Uninduced | 4.978 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 31.602 |
| SRR8400027 | Control - Root | 28.920 |