Gene detail

Gene detail information of Glyur001303s00026798.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G14720.1	0	MAP kinase 19
NR	XP_007149430.1	0	hypothetical protein PHAVU_005G069800g [Phaseolus vulgaris]
COG	YP_002560205.1	6.00E-21	hypothetical protein MCCL_0802 [Macrococcus caseolyticus JCSC5402]
Swissprot	tr\|Q9LUC3\|MPK19_ARATH	0	Mitogen-activated protein kinase 19
trEMBL	tr\|V7BTY9\|V7BTY9_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW21424.1}

Sequence

Transcript Sequence

>Glyur001303s00026798.1
CTTCGCAATTGTCTTTCTCTCCAACTCCTCTTTCTCTCTCTCTCTCCCCTCTGAGGTTAGATCCTCTGAAGTTAAGGGTTTCTGCTTCTGCTACACCCCCAACTTCTTGTTGTTCTCTTAGGTTTCATCTCGATCGGAACACCAATTTTGGAGGTTTTTTTTTGTTTGCTTGCTGAATTTTGAAGTCGGAGCTTGATCGTAGATCTGACTTTCTTTTGGTTTGTGAGGGAAGTGGAAGACACGGTAGTTATTAGCTGGTGACATTGATTTCTGTTTGATCTGTTCCCCACAAAGAAGGAAGGAAGGAAGAAGAACAAGATGCAGCAAGATCAACTCAAGAAGGATATTAAAGAGGTAGAGTTTTTCACTGAGTATGGGGATGCCAACAGATACAAAATTCTCGAAGTTATTGGGAAGGGTAGCTATGGAGTTGTTTGTGCAGCAATTGACACACACACTGGTGGAAAAGTTGCAATCAAGAAGATTCATGATGTTTTTGAGCATATCTCTGATGCCATTAGAATCCTCCGGGAAGTCAAGTTGCTAAGACTTTTGAGACACCCGGATATTGTTGAGATTAAGCGGATCATGTTGCCACCTTCCAAGAGGGAATTTAAAGATATTTATGTAGTCTTTGAGCTCATGGAATCTGATCTCCATCAAGTCATCAAAGCTAATGATGACTTGACCCGCGAACACCATCAGTTTTTTCTTTATCAGATGCTACGGGCAATGAAGTATATGCATACAGCAAATGTATATCACAGAGACCTTAAGCCTAAGAATATACTGGCAAATGCAAACTGCAAACTCAAAGTTTGTGATTTTGGACTGGCAAGAGTTGCATTCAATGATGCCCCAACAACAATTTTTTGGACGGATTATGTTGCTACAAGATGGTATAGAGCGCCAGAATTATGCGGTTCTTTCTCTTCTAAGCAATATGTTATATTTTCTGTTGTTTATCATTTTCTTTCCACCATGTTACAAGGGAGGACTATTGATCTCTCCTGGAAGTTGAATTTATCTGTCCTTCAGTATACACCAGCTATTGATATATGGAGCATTGGATGCATTTTTGCAGAGGTTCTAACAGGAAAGCCACTGTTTCCTGGTAAAAGTGTTGTGCATCAATTAGATTTGATTACTGATCTTCTTGGGACACCATCACCTGAAACAATTGCAGGAGTTCGAAATGAGAAGGCAAGGAAGTACTTGATGGAAATGCGGAAGAAACATCCCGTGCCATTTGAACAGAAATTTCCAAATGCTGATCCATTGGCAGTTCGCCTATTGCAAAGGCTTTTAGCATTTGATCCAAAAGATCGACCAACTGCTCAAGAGGCACTAGCTGATCCTTTCTTTAAGGGTTTGGCCAAAGTTGAGAGGGAACCTTCTTGTCAGCCAATTTCTAGAATGGAATTTGAGTTCGAGAGAAGACGTGTGACAAAGGACGATGTCAGGGAACTAATATATCGGGAAATACTAGAATATCATCCTCAGCTGCTTAAAGATTACATAAATGGAACTGAAGGCACAAACTTCATGTACCCAAGTGCAATAGATCAATTCAGAAAGCAATTTGCTTATCTTGAGGAAAATCATGGTAAATGTGGCCCAGTGATTCCTCCAGAAAGGAAGCATGTCTCCCTTCCAAGGTCCACTGTTCACTCTAGTACANTTTCTCCTAGCGCACAGCCATTTTTCGCTCCGCATGAGAATAAGCAAATCGCAGAAGAGGCATCCAAGGTTTCAAGAGCAGCTGAATCAAATTCTGGAAGTCAATCAAGGGGTTTACGACCTCCACCAAGGGCACCGGCAGCCAAACCAGGTAGAGTTGTAGGGGCAGTTCACTATGAAAATGGGAGAAACATAAAAGATGCTTATGACCAAAGGATCTTCTACCGAAACACTAATCTTCCTCAAGCAGTCTCCCCACACCCTTTCCAAAGGGTACACCCCACTAACTCAAAAACATCAGAAACATACAAGGATGTTTCACAAGGCAAACATCAACTCCCACCGCAGCAGTGTAGCGTGCCAGCCAGACCAGCTATTGATCTTAACGCCAATCCATACTACCAGCAGGGCAAGAATGATCACTTAAACGATCCGGTCACCGCTATCGATGCAAAGTTGCTGCATGCACAATCTCAATTTGGTGCAGCTGGTGCTGCAGCAGTAGCTGTTGCTGCTCACAGGCATTCTGGGGGCTTTCAGTATGGATTGACATAGATTGTAGGAGGGTCTCAAGAGAGACGTGCTTTTATGCTTTAGATGGGTTTAGTTTTTGTTTTCTACTTTCTGCTTTCACATTGCCATCCTTGTAATTATATGTACATCATTTAATTGGTTAATAAAAAAAATTGATTGTTTTCTCTCCATCTTGATGCAAAGGAGAACCTGGAATGGCAAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01303	73079	78012	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:4.5.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0004707 MAP kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001303s00026798.1	PF00069.20	Pkinase	25	349	8.20E-65

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	21.361
SRR1783600	control	21.464
SRR1783602	moderate drought stress	23.255
SRR1811619	moderate drought stress	22.870

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	30.629
DRR006520	Root Summer glycyrrhizin high producing strain	30.264
DRR006521	Root Winter glycyrrhizin high producing strain	16.949
DRR006522	Root Winter glycyrrhizin high producing strain	16.471
DRR006523	Root Summer glycyrrhizin low producing strain	58.977
DRR006524	Root Summer glycyrrhizin low producing strain	58.307
DRR006525	Leaf Summer glycyrrhizin high producing strain	52.634
DRR006526	Leaf Summer glycyrrhizin high producing strain	52.609

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	54.087
SRR2868004	Drought Stress (root)	64.780
SRR2967015	Control (root)	63.532

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	47.503
SRR9715740	Leaf	52.614
SRR9715741	Leaf	58.918
SRR9715739	Root	5.032
SRR9715742	Root	34.413
SRR9715743	Root	28.667

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	22.795
SRR8749028	MeJA induced 9h	55.207
SRR8749029	MeJA induced 9h	32.595
SRR8749030	Uninduced	150.613
SRR8749031	Uninduced	151.568
SRR8749032	Uninduced	81.169

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	35.724
SRR8400027	Control - Root	35.446