Gene detail information of Glyur001303s00026791 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G28100.3 | 2.00E-80 | |
| NR | XP_003543181.1 | 5.73E-165 | PREDICTED: uncharacterized protein LOC100306249 isoformX1 [Glycine max] |
| COG | YP_007079978.1 | 5.00E-16 | acetoacetate decarboxylase [Pleurocapsa sp. PCC 7327] |
| trEMBL | tr|I1M2V2|I1M2V2_SOYBN | 2.00E-165 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G33920.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01303 | 35933 | 40200 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.084 |
| SRR1783600 | control | 0.138 |
| SRR1783602 | moderate drought stress | 0.228 |
| SRR1811619 | moderate drought stress | 0.225 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 32.461 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 33.125 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.407 |
| SRR2868004 | Drought Stress (root) | 2.023 |
| SRR2967015 | Control (root) | 0.366 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 71.744 |
| SRR9715740 | Leaf | 66.929 |
| SRR9715741 | Leaf | 86.632 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.125 |
| SRR9715743 | Root | 0.099 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.590 |
| SRR8749028 | MeJA induced 9h | 2.575 |
| SRR8749029 | MeJA induced 9h | 1.126 |
| SRR8749030 | Uninduced | 1.457 |
| SRR8749031 | Uninduced | 0.149 |
| SRR8749032 | Uninduced | 1.005 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.390 |
| SRR8400027 | Control - Root | 0.636 |