Gene detail information of Glyur001303s00026788 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G14770.1 | 1.00E-72 | Nodulin MtN3 family protein |
| NR | XP_003540515.1 | 1.61E-143 | PREDICTED: bidirectional sugar transporter SWEET2 isoform X1 [Glycine max] |
| Swissprot | tr|Q9LH79|SWET2_ARATH | 3.00E-105 | Bidirectional sugar transporter SWEET2 |
| trEMBL | tr|I1LVA8|I1LVA8_SOYBN | 6.00E-144 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G36300.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01303 | 21021 | 24453 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001303s00026788.1 | PF03083.11 | MtN3_slv | 18 | 103 | 4.00E-19 |
| Glyur001303s00026788.1 | PF03083.11 | MtN3_slv | 138 | 222 | 1.90E-22 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.876 |
| SRR1783600 | control | 0.926 |
| SRR1783602 | moderate drought stress | 1.365 |
| SRR1811619 | moderate drought stress | 1.225 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.662 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.418 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.358 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.393 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.895 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.883 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.092 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.675 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.990 |
| SRR2868004 | Drought Stress (root) | 22.871 |
| SRR2967015 | Control (root) | 25.132 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 30.198 |
| SRR9715740 | Leaf | 33.980 |
| SRR9715741 | Leaf | 43.493 |
| SRR9715739 | Root | 1.351 |
| SRR9715742 | Root | 1.653 |
| SRR9715743 | Root | 2.877 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.396 |
| SRR8749028 | MeJA induced 9h | 8.067 |
| SRR8749029 | MeJA induced 9h | 5.420 |
| SRR8749030 | Uninduced | 8.291 |
| SRR8749031 | Uninduced | 57.809 |
| SRR8749032 | Uninduced | 22.664 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.473 |
| SRR8400027 | Control - Root | 7.914 |