Gene detail information of Glyur001299s00039016 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G36895.1 | 1.00E-75 | |
| NR | XP_007144335.1 | 1.27E-135 | hypothetical protein PHAVU_007G147500g [Phaseolus vulgaris] |
| trEMBL | tr|V7BEQ6|V7BEQ6_PHAVU | 5.00E-136 | Uncharacterized protein {ECO:0000313|EMBL:ESW16329.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01299 | 41274 | 44661 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.017 |
| SRR1783600 | control | 6.135 |
| SRR1783602 | moderate drought stress | 7.381 |
| SRR1811619 | moderate drought stress | 7.340 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.036 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.592 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.738 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.946 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.273 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.243 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 28.750 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 26.669 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.733 |
| SRR2868004 | Drought Stress (root) | 10.435 |
| SRR2967015 | Control (root) | 10.157 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 30.129 |
| SRR9715740 | Leaf | 47.092 |
| SRR9715741 | Leaf | 30.609 |
| SRR9715739 | Root | 7.072 |
| SRR9715742 | Root | 4.555 |
| SRR9715743 | Root | 5.753 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.634 |
| SRR8749028 | MeJA induced 9h | 7.475 |
| SRR8749029 | MeJA induced 9h | 7.422 |
| SRR8749030 | Uninduced | 7.744 |
| SRR8749031 | Uninduced | 7.540 |
| SRR8749032 | Uninduced | 9.110 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.581 |
| SRR8400027 | Control - Root | 10.152 |