Gene detail information of Glyur001298s00033400 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G02640.1 | 6.00E-25 | |
| NR | KHN39133.1 | 1.66E-69 | hypothetical protein glysoja_017427 [Glycine soja] |
| trEMBL | tr|I1L8N7|I1L8N7_SOYBN | 1.00E-69 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G05390.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01298 | 72637 | 73101 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.079 |
| SRR1783600 | control | 0.007 |
| SRR1783602 | moderate drought stress | 0.469 |
| SRR1811619 | moderate drought stress | 0.279 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.874 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.336 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.475 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.666 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.212 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.573 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.113 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.472 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.495 |
| SRR2868004 | Drought Stress (root) | 12.828 |
| SRR2967015 | Control (root) | 13.822 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 17.637 |
| SRR9715740 | Leaf | 20.019 |
| SRR9715741 | Leaf | 17.723 |
| SRR9715739 | Root | 0.926 |
| SRR9715742 | Root | 1.978 |
| SRR9715743 | Root | 1.915 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.955 |
| SRR8749028 | MeJA induced 9h | 3.246 |
| SRR8749029 | MeJA induced 9h | 5.127 |
| SRR8749030 | Uninduced | 1.184 |
| SRR8749031 | Uninduced | 0.590 |
| SRR8749032 | Uninduced | 0.903 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.819 |
| SRR8400027 | Control - Root | 4.091 |