Gene detail information of Glyur001296s00027376 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G38260.1 | 4.00E-18 | Protein kinase superfamily protein |
| NR | XP_006583427.1 | 1.25E-82 | PREDICTED: probable serine/threonine-protein kinase At1g18390-like isoform X1 [Glycine max] |
| Swissprot | tr|P0C5E2|Y1839_ARATH | 3.00E-21 | Probable serine/threonine-protein kinase At1g18390 (Precursor) |
| trEMBL | tr|K7L0M4|K7L0M4_SOYBN | 7.00E-86 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G10514.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01296 | 3211 | 9700 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001296s00027376.1 | PF14380.1 | WAK_assoc | 187 | 264 | 7.60E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.409 |
| SRR1783600 | control | 3.174 |
| SRR1783602 | moderate drought stress | 2.170 |
| SRR1811619 | moderate drought stress | 2.071 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.519 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.556 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.516 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.647 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.995 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.911 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.112 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.119 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.990 |
| SRR2868004 | Drought Stress (root) | 13.167 |
| SRR2967015 | Control (root) | 12.072 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.275 |
| SRR9715740 | Leaf | 0.544 |
| SRR9715741 | Leaf | 0.829 |
| SRR9715739 | Root | 0.908 |
| SRR9715742 | Root | 0.763 |
| SRR9715743 | Root | 0.852 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.277 |
| SRR8749028 | MeJA induced 9h | 27.116 |
| SRR8749029 | MeJA induced 9h | 18.237 |
| SRR8749030 | Uninduced | 5.358 |
| SRR8749031 | Uninduced | 4.174 |
| SRR8749032 | Uninduced | 2.853 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.242 |
| SRR8400027 | Control - Root | 4.075 |