Gene detail information of Glyur001296s00027375 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G67000.1 | 2.00E-10 | Protein kinase superfamily protein |
| NR | KEH27003.1 | 5.19E-66 | wall-associated receptor kinase galacturonan-binding protein [Medicago truncatula] |
| Swissprot | tr|Q5BQ05|Y1838_ARATH | 1.00E-08 | Uncharacterized protein At1g18380 (Precursor) |
| trEMBL | tr|A0A072UD47|A0A072UD47_MEDTR | 2.00E-66 | Wall-associated receptor kinase galacturonan-binding protein {ECO:0000313|EMBL:KEH27003.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01296 | 1595 | 2431 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.457 |
| SRR1783600 | control | 4.651 |
| SRR1783602 | moderate drought stress | 7.912 |
| SRR1811619 | moderate drought stress | 8.104 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.498 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.941 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.129 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.923 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 59.259 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 59.859 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 24.100 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 22.318 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.974 |
| SRR2868004 | Drought Stress (root) | 11.877 |
| SRR2967015 | Control (root) | 8.915 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.724 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 15.179 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 15.722 |
| SRR9715743 | Root | 12.621 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.042 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.476 |
| SRR8400027 | Control - Root | 3.574 |