Gene detail information of Glyur001290s00040712 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G71110.1 | 2.00E-162 | |
| NR | XP_003530896.1 | 0 | PREDICTED: uncharacterized protein LOC100796983 [Glycine max] |
| trEMBL | tr|I1KZF1|I1KZF1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G47420.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01290 | 29245 | 34380 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.316 |
| SRR1783600 | control | 5.386 |
| SRR1783602 | moderate drought stress | 3.298 |
| SRR1811619 | moderate drought stress | 3.238 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.175 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.344 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.089 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.089 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.191 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.225 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.197 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.333 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.892 |
| SRR2868004 | Drought Stress (root) | 21.231 |
| SRR2967015 | Control (root) | 14.608 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.973 |
| SRR9715740 | Leaf | 2.236 |
| SRR9715741 | Leaf | 1.737 |
| SRR9715739 | Root | 2.190 |
| SRR9715742 | Root | 12.326 |
| SRR9715743 | Root | 10.829 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.052 |
| SRR8749028 | MeJA induced 9h | 1.578 |
| SRR8749029 | MeJA induced 9h | 0.918 |
| SRR8749030 | Uninduced | 0.669 |
| SRR8749031 | Uninduced | 0.188 |
| SRR8749032 | Uninduced | 0.171 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 43.402 |
| SRR8400027 | Control - Root | 60.090 |