Gene detail information of Glyur001288s00028005 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G06570.2 | 2.00E-88 | alpha/beta-Hydrolases superfamily protein |
| NR | XP_003519022.1 | 2.36E-165 | PREDICTED: probable carboxylesterase 15-like [Glycine max] |
| COG | YP_007513232.1 | 2.00E-23 | putative lipase/esterase [Bradyrhizobium oligotrophicum S58] |
| Swissprot | tr|Q9FG13|CXE15_ARATH | 4.00E-115 | Probable carboxylesterase 15 |
| trEMBL | tr|K7K8Y6|K7K8Y6_SOYBN | 9.00E-166 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G27091.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01288 | 50957 | 54680 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001288s00028005.1 | PF07859.8 | Abhydrolase_3 | 81 | 298 | 1.30E-53 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.354 |
| SRR1783600 | control | 0.251 |
| SRR1783602 | moderate drought stress | 0.156 |
| SRR1811619 | moderate drought stress | 0.155 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.518 |
| SRR2868004 | Drought Stress (root) | 7.545 |
| SRR2967015 | Control (root) | 5.197 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.057 |
| SRR9715740 | Leaf | 0.032 |
| SRR9715741 | Leaf | 0.095 |
| SRR9715739 | Root | 0.898 |
| SRR9715742 | Root | 0.189 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 18.014 |
| SRR8749028 | MeJA induced 9h | 10.189 |
| SRR8749029 | MeJA induced 9h | 35.196 |
| SRR8749030 | Uninduced | 5.382 |
| SRR8749031 | Uninduced | 1.725 |
| SRR8749032 | Uninduced | 2.179 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.589 |
| SRR8400027 | Control - Root | 4.189 |