Gene detail information of Glyur001287s00026985 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G30770.1 | 1.00E-22 | Putative membrane lipoprotein |
| NR | XP_003630303.1 | 2.88E-52 | hypothetical protein MTR_8g094040 [Medicago truncatula] |
| trEMBL | tr|G7LEW9|G7LEW9_MEDTR | 1.00E-52 | Membrane lipoprotein, putative {ECO:0000313|EMBL:AET04779.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01287 | 54506 | 54931 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.613 |
| SRR1783600 | control | 0.733 |
| SRR1783602 | moderate drought stress | 1.866 |
| SRR1811619 | moderate drought stress | 2.077 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.815 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.954 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.978 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.256 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.604 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.084 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.412 |
| SRR2868004 | Drought Stress (root) | 0.140 |
| SRR2967015 | Control (root) | 0.088 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.751 |
| SRR9715740 | Leaf | 1.773 |
| SRR9715741 | Leaf | 0.928 |
| SRR9715739 | Root | 0.038 |
| SRR9715742 | Root | 0.590 |
| SRR9715743 | Root | 1.176 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.904 |
| SRR8749028 | MeJA induced 9h | 0.699 |
| SRR8749029 | MeJA induced 9h | 0.723 |
| SRR8749030 | Uninduced | 0.365 |
| SRR8749031 | Uninduced | 0.373 |
| SRR8749032 | Uninduced | 0.201 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.742 |
| SRR8400027 | Control - Root | 2.160 |