Gene detail information of Glyur001283s00033526 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G31500.1 | 4.00E-37 | cytochrome P450, family 83, subfamily B, polypeptide 1 |
| NR | KHN02071.1 | 1.98E-96 | Cytochrome P450 83B1 [Glycine soja] |
| COG | YP_007156104.1 | 4.00E-06 | Unspecific monooxygenase [Anabaena cylindrica PCC 7122] |
| Swissprot | tr|O65782|C83B1_ARATH | 2.00E-42 | Cytochrome P450 83B1 |
| trEMBL | tr|I1J6H2|I1J6H2_SOYBN | 8.00E-97 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G17330.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01283 | 77518 | 79163 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP83A1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001283s00033526.1 | PF00067.17 | p450 | 2 | 203 | 4.70E-30 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.354 |
| SRR1783600 | control | 1.150 |
| SRR1783602 | moderate drought stress | 1.462 |
| SRR1811619 | moderate drought stress | 1.906 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.143 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.088 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.078 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.075 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.378 |
| SRR2868004 | Drought Stress (root) | 3.467 |
| SRR2967015 | Control (root) | 4.327 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.202 |
| SRR9715740 | Leaf | 0.051 |
| SRR9715741 | Leaf | 0.117 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.053 |
| SRR8749028 | MeJA induced 9h | 0.816 |
| SRR8749029 | MeJA induced 9h | 0.378 |
| SRR8749030 | Uninduced | 0.104 |
| SRR8749031 | Uninduced | 0.054 |
| SRR8749032 | Uninduced | 0.127 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.374 |
| SRR8400027 | Control - Root | 0.000 |