Gene detail information of Glyur001283s00033515 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003538507.1 | 8.11E-21 | PREDICTED: uncharacterized protein LOC100306576 [Glycine max] |
| trEMBL | tr|C6SZY7|C6SZY7_SOYBN | 3.00E-21 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G36030.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01283 | 9208 | 9474 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.137 |
| SRR1783600 | control | 0.213 |
| SRR1783602 | moderate drought stress | 0.136 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.321 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.620 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.096 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.616 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.030 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.769 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.617 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.578 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.397 |
| SRR2868004 | Drought Stress (root) | 14.866 |
| SRR2967015 | Control (root) | 8.841 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 206.409 |
| SRR9715740 | Leaf | 32.417 |
| SRR9715741 | Leaf | 105.694 |
| SRR9715739 | Root | 0.767 |
| SRR9715742 | Root | 5.244 |
| SRR9715743 | Root | 3.827 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 1.088 |
| SRR8749029 | MeJA induced 9h | 2.716 |
| SRR8749030 | Uninduced | 0.881 |
| SRR8749031 | Uninduced | 0.725 |
| SRR8749032 | Uninduced | 2.275 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.509 |
| SRR8400027 | Control - Root | 2.151 |