Gene detail information of Glyur001282s00029606 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G37710.1 | 1.00E-05 | VQ motif-containing protein |
| NR | XP_004509057.1 | 7.91E-39 | PREDICTED: uncharacterized protein LOC101503444 [Cicer arietinum] |
| trEMBL | tr|I3S4T6|I3S4T6_MEDTR | 4.00E-39 | Uncharacterized protein {ECO:0000313|EMBL:AFK35278.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01282 | 62588 | 63082 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001282s00029606.1 | PF05678.9 | VQ | 49 | 69 | 1.50E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.758 |
| SRR1783600 | control | 0.741 |
| SRR1783602 | moderate drought stress | 0.154 |
| SRR1811619 | moderate drought stress | 0.153 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.438 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.217 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.446 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.447 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.926 |
| SRR2868004 | Drought Stress (root) | 40.779 |
| SRR2967015 | Control (root) | 8.669 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.437 |
| SRR9715740 | Leaf | 0.624 |
| SRR9715741 | Leaf | 7.512 |
| SRR9715739 | Root | 1.282 |
| SRR9715742 | Root | 3.010 |
| SRR9715743 | Root | 2.137 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.948 |
| SRR8749028 | MeJA induced 9h | 12.204 |
| SRR8749029 | MeJA induced 9h | 25.329 |
| SRR8749030 | Uninduced | 48.236 |
| SRR8749031 | Uninduced | 212.301 |
| SRR8749032 | Uninduced | 36.232 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.638 |
| SRR8400027 | Control - Root | 6.001 |