Gene detail information of Glyur001282s00029601 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G10810.1 | 2.00E-04 | |
| NR | XP_003608555.1 | 3.65E-23 | hypothetical protein MTR_4g097420 [Medicago truncatula] |
| trEMBL | tr|G7JF83|G7JF83_MEDTR | 1.00E-23 | Uncharacterized protein {ECO:0000313|EMBL:AES90752.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01282 | 54172 | 54426 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.968 |
| SRR1783600 | control | 1.057 |
| SRR1783602 | moderate drought stress | 1.326 |
| SRR1811619 | moderate drought stress | 1.611 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.789 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.550 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.456 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.495 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.041 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.582 |
| SRR2868004 | Drought Stress (root) | 6.171 |
| SRR2967015 | Control (root) | 5.614 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.058 |
| SRR9715741 | Leaf | 0.314 |
| SRR9715739 | Root | 0.466 |
| SRR9715742 | Root | 1.348 |
| SRR9715743 | Root | 1.574 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.162 |
| SRR8749031 | Uninduced | 0.142 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.607 |
| SRR8400027 | Control - Root | 2.760 |