Gene detail information of Glyur001280s00031954 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | BAF50740.1 | 1.55E-48 | trypsin inhibitor [Apios americana] |
| Swissprot | tr|Q41066|IBB2_PEA | 1.00E-34 | Seed trypsin/chymotrypsin inhibitor TI5-72 (Precursor) |
| trEMBL | tr|A4PIB8|A4PIB8_9FABA | 6.00E-49 | Trypsin inhibitor {ECO:0000313|EMBL:BAF50740.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01280 | 75602 | 75976 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001280s00031954.1 | PF00228.15 | Bowman-Birk_leg | 57 | 81 | 5.70E-06 |
| Glyur001280s00031954.1 | PF00228.15 | Bowman-Birk_leg | 83 | 107 | 1.30E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.483 |
| SRR1783600 | control | 4.152 |
| SRR1783602 | moderate drought stress | 5.946 |
| SRR1811619 | moderate drought stress | 10.081 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.971 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.150 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.393 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.139 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 19.785 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 19.871 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.910 |
| SRR2868004 | Drought Stress (root) | 7.470 |
| SRR2967015 | Control (root) | 10.059 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.052 |
| SRR9715740 | Leaf | 1.595 |
| SRR9715741 | Leaf | 1.524 |
| SRR9715739 | Root | 0.480 |
| SRR9715742 | Root | 2.844 |
| SRR9715743 | Root | 0.784 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.081 |
| SRR8749030 | Uninduced | 1.830 |
| SRR8749031 | Uninduced | 0.505 |
| SRR8749032 | Uninduced | 6.092 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.978 |
| SRR8400027 | Control - Root | 0.400 |