Gene detail information of Glyur001280s00031951 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | BAF50740.1 | 1.77E-51 | trypsin inhibitor [Apios americana] |
| Swissprot | tr|Q41066|IBB2_PEA | 6.00E-40 | Seed trypsin/chymotrypsin inhibitor TI5-72 (Precursor) |
| trEMBL | tr|A4PIB8|A4PIB8_9FABA | 7.00E-52 | Trypsin inhibitor {ECO:0000313|EMBL:BAF50740.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01280 | 66581 | 66961 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001280s00031951.1 | PF00228.15 | Bowman-Birk_leg | 59 | 83 | 3.10E-09 |
| Glyur001280s00031951.1 | PF00228.15 | Bowman-Birk_leg | 85 | 109 | 5.60E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5549.794 |
| SRR1783600 | control | 5281.871 |
| SRR1783602 | moderate drought stress | 1952.559 |
| SRR1811619 | moderate drought stress | 1951.555 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.384 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.417 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.870 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.054 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.303 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.328 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1509.299 |
| SRR2868004 | Drought Stress (root) | 626.302 |
| SRR2967015 | Control (root) | 1097.464 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 54.307 |
| SRR9715740 | Leaf | 7.313 |
| SRR9715741 | Leaf | 6.162 |
| SRR9715739 | Root | 78.196 |
| SRR9715742 | Root | 1163.638 |
| SRR9715743 | Root | 984.686 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.597 |
| SRR8749028 | MeJA induced 9h | 3.960 |
| SRR8749029 | MeJA induced 9h | 3.539 |
| SRR8749030 | Uninduced | 2.231 |
| SRR8749031 | Uninduced | 2.496 |
| SRR8749032 | Uninduced | 6.414 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1535.015 |
| SRR8400027 | Control - Root | 574.056 |