Gene detail

Gene detail information of Glyur001280s00031949.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G00710.1	0	BR-signaling kinase 3
NR	XP_004510799.1	0	PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Cicer arietinum]
COG	YP_284821.1	1.00E-14	protein kinase:GAF [Dechloromonas aromatica RCB]
Swissprot	tr\|Q9FHD7\|Y5126_ARATH	0	Probable serine/threonine-protein kinase At5g41260
trEMBL	tr\|I1JK97\|I1JK97_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA03G01300.3}

Sequence

Transcript Sequence

>Glyur001280s00031949.1
AACTGTTTTTGTTCATAGTGTATAAATATATATATATTTTTTTTAAAATTGGGTTTTAATACTTTACTTGATCTGGGTTGAAGAATTGTTGGCTTCTGGGGAAAAGAAAAATGACTGATTTTATGAGGAAAATAATAAGTGGGTTTTGATTGAATCGAGGAAAAGACTCGAACTTTGCAAATTGCAAAACGTATTTTTGTTCTAGGGCGAAAATGTGGATCTTGTAAAAGCTGTTGATTTGATCGAGAAAAGAAGTAAAAAACAAAAAGAGAAAAGAGAAAATAGGAGATACATTTTTATCAGCTTCAGGTGGATCAACTTTTGTCCTCTGCCATTGGAGAAGTCAGAACGAAGAAGAAGAAGAAGAAGAAGCTTAAAGGTGAAGTAGCTTTTTAGTTACATGAGCTTTGGACTTTGGTGACAAAAAATTGTTAAGGCCTAGTAGAGAGGTAACATGTGCCAGTGCATAAGTTTGATCGAGTCCAGGTGTTGCTGAGTGGACTGAATGCTGTATTTGGTCATATTCTAAAGGCACATCTTTGGAAGTGGAAGAGGTGTCATTGCTTTGAATCTGATTTTAGTGTATCAACATGGGGATTCAATGCTCCACCCTCGTGCCATGTTGCGTGGATTCACAAGTAAAGGCATCTGTTCTTGAAGTTCCAGATGCCGAAAATCAGGATAGAATTGAGGCCAATATTATTGGGCCTGCATTTCGCGAATTCATGCTGGAGCAGCTTAATAATGCAACATCCGGTTTTGCTGTTGAGAATATAGTATCTGAACATGGAGAAAAGGCCCCAAATGTTGTTTACAAAGGGAAGATGGAGAATCAAATGAGGATTGCTGTTAAGCGGTTTAATAGAAATGCTTGGCCTGATGCTGGGCAGTTTTTGGAGGAAGCTAGGTCAGTTGGTCGGCTTCGTAATCAAAGATTGGCAAATTTGCTTGGTTGTTGTTGTGAAGGCGATGAGAGGTTGCTCGTGACTGAATATATGCCCAATGAAACACTTGCAAAACACCTTTTCCATTGGGAAACACAACCAATGAAATGGGCAATGNGACTAAGAGTTGTTCTACATCTTGCAGAAGCTCTAGAATACTGCACAAGCCAAGGGCGTGCCCTCTATCATGACCTTAATGCATATAGAGTTCTATTTGATGAGGATGGTAATCCTAGGCTTTCAAGTTTTGGCCTTATGAAGAATAGTAGGGATGGGAAAAGTTATAGCACAAATTTGGCATTTACCCCTCCAGAGTATCTCAGAACAGGGAGAGTAACGCCAGAAAGTGTGATATATAGCTTTGGCACTCTTTTGCTTGACCTTCTTAGTGGGAAGCATATCCCTCCCAGCCATGCCCTTGATTTGATACNGGACAGAAATCTTCAGATGCTAACAGATTCTTGTTTGGAAGGACAATTTTCTGATGATGATGGAACTGAGTTGGTGCGCTTGGCATCTCGATGTTTACNGTATGAACCTAGAGAAAGGCCTAATCCAAAGTCATTAGTGGCTGCTTTGGCTCCTCTTCAGAAAGAAACAGAGGTTCCTTCACACATATTGATGGGTATTCCTCACAGTGCTACGCTTCCTTCGTTGTCCCCACTTGGTGAAGCATGTTCAAGAAAGGACTTGACTGCCATNCATGAAGTTCTCGAAAATATTGGCTATAAAGATGATGAAGGAGTGACAAATGAGTTCATTGATGTTGGAACAATGGTTTCTCCAACCGTCCATGCGCGGCGCAGCTTGTGTTATCTCATTAGTGACATGCCACAGGAAGCACTGAATGATGCAATNCAAGCACAAGTAATTTCCCCTGTATGGCACATTGCATCTTATCTTCAATCTGTTTCCCTGGCTGGACTAGGGATGGAGAATGAAGCCCAAGTTGCACTTTTAGAGGGAACAACACTGGAAGCCAAGCGAAATGTACGTCCCAGACAAAAGTGAAGAGCTTATACAGAGACAGTTTCTTGCTGATTTGTGTGTATCACCACCCTACTGCATNGGTTACAAATTTCATCTTGGATAAACAATAGATCCATCCCCTCCAAAAAAAAAAAGTTCACCATATTTTTTAGTGTCATGCATGTGTTTGAAGAATTCTTGAAGAAACAATGATTGCATGAGTGTTTGGTAACACCCCTCCCCCTTTTTATTGGGTAGNATTGGATGTTGGTTTAGTTCTACTATGATTTGATTACTTTAGCATGAATCCCAACTTAGCATTATTTGTTTCCCCAATAGGAAAAATGTGATATGATAAGCTCTGTTGTTCACAGCTGATA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01280	54038	60270	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.16.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K14500	BSK	EC:2.7.11.1	Plant hormone signal transduction	map04075

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005515 protein binding

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001280s00031949.1	PF07714.12	Pkinase_Tyr	73	310	5.90E-28

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	12.717
SRR1783600	control	12.634
SRR1783602	moderate drought stress	8.409
SRR1811619	moderate drought stress	8.275

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	8.808
DRR006520	Root Summer glycyrrhizin high producing strain	8.792
DRR006521	Root Winter glycyrrhizin high producing strain	3.561
DRR006522	Root Winter glycyrrhizin high producing strain	3.866
DRR006523	Root Summer glycyrrhizin low producing strain	5.906
DRR006524	Root Summer glycyrrhizin low producing strain	5.202
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.490
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.344

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	11.301
SRR2868004	Drought Stress (root)	8.794
SRR2967015	Control (root)	10.631

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.487
SRR9715740	Leaf	1.494
SRR9715741	Leaf	1.025
SRR9715739	Root	1.129
SRR9715742	Root	4.668
SRR9715743	Root	4.004

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	5.175
SRR8749028	MeJA induced 9h	1.874
SRR8749029	MeJA induced 9h	1.735
SRR8749030	Uninduced	2.086
SRR8749031	Uninduced	1.179
SRR8749032	Uninduced	1.134

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	6.808
SRR8400027	Control - Root	7.223