Gene detail information of Glyur001279s00031473 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G31340.1 | 0 | embryo defective 1381 |
| NR | XP_004502052.1 | 0 | PREDICTED: uncharacterized protein LOC101508050 isoform X1 [Cicer arietinum] |
| trEMBL | tr|G7J7B5|G7J7B5_MEDTR | 0 | Embryo defective 1381 protein {ECO:0000313|EMBL:AES71675.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01279 | 67654 | 76896 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.672 |
| SRR1783600 | control | 2.576 |
| SRR1783602 | moderate drought stress | 3.742 |
| SRR1811619 | moderate drought stress | 3.628 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.852 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.909 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.046 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.991 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.803 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.713 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.249 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.265 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.798 |
| SRR2868004 | Drought Stress (root) | 2.779 |
| SRR2967015 | Control (root) | 2.476 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.720 |
| SRR9715740 | Leaf | 6.070 |
| SRR9715741 | Leaf | 2.340 |
| SRR9715739 | Root | 0.806 |
| SRR9715742 | Root | 3.238 |
| SRR9715743 | Root | 2.770 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.553 |
| SRR8749028 | MeJA induced 9h | 1.803 |
| SRR8749029 | MeJA induced 9h | 0.841 |
| SRR8749030 | Uninduced | 0.149 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.074 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.633 |
| SRR8400027 | Control - Root | 5.124 |