Gene detail

Gene detail information of Glyur001278s00025614.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G14700.1	5.00E-117	purple acid phosphatase 3
NR	XP_004503250.1	0	PREDICTED: purple acid phosphatase 3-like [Cicer arietinum]
COG	YP_007545525.1	2.00E-44	acid phosphatase [Glaciecola psychrophila 170]
Swissprot	tr\|Q8VYZ2\|PPA8_ARATH	8.00E-145	Purple acid phosphatase 8 (Precursor)
trEMBL	tr\|G7LE88\|G7LE88_MEDTR	0	Purple acid phosphatase family protein {ECO:0000313\|EMBL:AET05619.1}

Sequence

Transcript Sequence

>Glyur001278s00025614.1
ATTATAAATACAAATAAATTGTCCAACTCCCTCCCTCCCTCCTACAACTTGTGAACACTCGATCATCTTATCCCGAGNGAGCTAGCAGAAGCACACAAACAAACAGGTACATGGCTGCAGTGTTGTGGGTATTGGTGGCTGCTTTCATGTGTGTATCAGCTGCTGATGCTGAGCTCCAACGCCTGCTGCACGACCACCCTGCTCTCAAACCTGATTCCTCACTCACCTTCCTCGTCATTGGAGACTGGGGAAGGAAAGGAACCTTCAACCAATCCCAAGTAGCTATTCAGATGGGAAGAGTTGCTACAAATTTAAACATTGACTTTGTGATATCTACCGGAGACAACTTCTATGACGATGGATTGAACGGTATANACGACCCTGCATTCCAAGACTCCTTCTCAAACATCTACACTGCCAAAAGCCTCCAAAAGCAATGGTACAATGTGTTGGGCAACCATGACTACAGGGGAGATGTTGAAGCACAATTAAATCCAATCCTTCAGAATATTGATCATCGATGGTTTTGCCAGAGATCTTTTATTGTTGATGCCGGAATTGCTGAGTTCTTCTTCGTTGATACAACTCCCTTTGTGGACAAGTACTTTGACAAGCCNAAGGATCACAAGTATGATTGGAGAGGTGTTCTTCCAAGAAAGAAATATTTATCAAAGCTCTTAAAGGCAAATCTCTCTATCATTNATCTGGAAATAGCATTAAAGGGTTCTGCTGCCGACTGGAAGATTGTTGTGGGGCATCATCCTGTAAGAAGCATAGGACACCACGGTGACACCAAAGAGCTCATAACACAACTCCTCCCAATCCTTGAGGCTAACAATGTTGATATGTACATTAATGGGCATGACCACTGCTTGGAACACATAAGCAGCACCAGCAGCCAAATCCAGTTCTTAACTAGTGGCGGAGGTTCAAAGGCATGGAAAGGAGACATTGATAAAAATAAGAGGGATGGGGTGAAGTTTTACTACGATGGGCAAGGATTTATGTCTGTTGAGATCGAAAGAAGTAATGTCAAAGTTGTTTACTATGATATTTTTGGCAACGTTCTGCATGTTCTGAATCTATCCAAGGGGCTACATTCTGCCATATAGAAGAGTCTCNATAGTATATCGAATCAGGCCACTGAAGCATGGTTTTATGATTGATNTTAGTCGGCTTATATATATATCCTTAGATACAAATTTGAATGAATTAATATATGAGTAATCCAGTCAGCTTATATCATCAGTTATGTATCCCATTAAAAATGTATATGCAATGTAGTTATAATTATACTATTTCAATTAATTATTTAGGTACGTTCAGTCATAAGAAGCATGAACAAAAGGAGGCAAGACTATGAAGAAAATTGATAATGAGAAGAAAAAAAATAAATAGAGAACCAAGTAGCTATA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01278	35516	37670	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K14379	ACP5	EC:3.1.3.2	Lysosome	map04142
			Osteoclast differentiation	map04380
			Rheumatoid arthritis	map05323

Gene Ontology

molecular_function

GO:0003993 acid phosphatase activity

GO:0016787 hydrolase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001278s00025614.1	PF00149.23	Metallophos	39	254	1.20E-16

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	14.060
SRR1783600	control	14.130
SRR1783602	moderate drought stress	13.417
SRR1811619	moderate drought stress	13.399

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.869
DRR006520	Root Summer glycyrrhizin high producing strain	2.790
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	136.181
DRR006526	Leaf Summer glycyrrhizin high producing strain	136.388

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	31.662
SRR2868004	Drought Stress (root)	9.960
SRR2967015	Control (root)	4.821

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	67.515
SRR9715740	Leaf	89.142
SRR9715741	Leaf	59.331
SRR9715739	Root	3.906
SRR9715742	Root	5.307
SRR9715743	Root	5.909

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.210
SRR8749029	MeJA induced 9h	0.025
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.087
SRR8749032	Uninduced	0.112

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	14.168
SRR8400027	Control - Root	9.007