Gene detail information of Glyur001278s00025613 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G68090.1 | 1.00E-103 | annexin 5 |
| NR | XP_004503249.1 | 0 | PREDICTED: annexin D5-like [Cicer arietinum] |
| Swissprot | tr|Q9C9X3|ANXD5_ARATH | 3.00E-128 | Annexin D5 |
| trEMBL | tr|G7LE90|G7LE90_MEDTR | 0 | Annexin {ECO:0000256|RuleBase:RU003540} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01278 | 25551 | 28709 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001278s00025613.1 | PF00191.15 | Annexin | 16 | 80 | 3.80E-19 |
| Glyur001278s00025613.1 | PF00191.15 | Annexin | 88 | 150 | 8.00E-14 |
| Glyur001278s00025613.1 | PF00191.15 | Annexin | 170 | 235 | 3.20E-21 |
| Glyur001278s00025613.1 | PF00191.15 | Annexin | 245 | 310 | 1.40E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 19.201 |
| SRR1783600 | control | 18.830 |
| SRR1783602 | moderate drought stress | 21.073 |
| SRR1811619 | moderate drought stress | 20.858 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 29.572 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 29.250 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 74.692 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 72.493 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 29.550 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 29.529 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.825 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.834 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 29.593 |
| SRR2868004 | Drought Stress (root) | 31.345 |
| SRR2967015 | Control (root) | 23.368 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.128 |
| SRR9715740 | Leaf | 14.924 |
| SRR9715741 | Leaf | 13.146 |
| SRR9715739 | Root | 6.849 |
| SRR9715742 | Root | 19.070 |
| SRR9715743 | Root | 16.665 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 40.081 |
| SRR8749028 | MeJA induced 9h | 57.562 |
| SRR8749029 | MeJA induced 9h | 48.520 |
| SRR8749030 | Uninduced | 57.435 |
| SRR8749031 | Uninduced | 73.276 |
| SRR8749032 | Uninduced | 53.348 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 32.234 |
| SRR8400027 | Control - Root | 27.292 |