Gene detail information of Glyur001277s00024307.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G47220.1 | 4.00E-25 | ethylene responsive element binding factor 2 |
| NR | XP_003541718.1 | 9.94E-62 | PREDICTED: ethylene-responsive transcription factor ERF091-like [Glycine max] |
| Swissprot | tr|O04681|PTI5_SOLLC | 1.00E-28 | Pathogenesis-related genes transcriptional activator PTI5 |
| trEMBL | tr|I1M1X7|I1M1X7_SOYBN | 4.00E-62 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G30710.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01277 | 69335 | 70730 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | ERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001277s00024307.1 | PF00847.15 | AP2 | 114 | 164 | 2.40E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.638 |
| SRR1783600 | control | 1.615 |
| SRR1783602 | moderate drought stress | 6.732 |
| SRR1811619 | moderate drought stress | 6.373 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.685 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.742 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.741 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.222 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.835 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.625 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.024 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.238 |
| SRR2868004 | Drought Stress (root) | 0.301 |
| SRR2967015 | Control (root) | 0.498 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.995 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 3.830 |
| SRR9715739 | Root | 0.098 |
| SRR9715742 | Root | 2.015 |
| SRR9715743 | Root | 2.237 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.553 |
| SRR8749028 | MeJA induced 9h | 2.463 |
| SRR8749029 | MeJA induced 9h | 0.555 |
| SRR8749030 | Uninduced | 0.975 |
| SRR8749031 | Uninduced | 0.097 |
| SRR8749032 | Uninduced | 0.175 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.375 |
| SRR8400027 | Control - Root | 1.532 |