Gene detail information of Glyur001277s00024304 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G18470.1 | 3.00E-82 | negative regulator of systemic acquired resistance (SNI1) |
| NR | XP_004505117.1 | 0 | PREDICTED: uncharacterized protein LOC101498765 [Cicer arietinum] |
| trEMBL | tr|V7C8M4|V7C8M4_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW25688.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01277 | 53670 | 58628 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.667 |
| SRR1783600 | control | 3.655 |
| SRR1783602 | moderate drought stress | 2.806 |
| SRR1811619 | moderate drought stress | 2.847 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.499 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.353 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.214 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.131 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.613 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.563 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.678 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.632 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.956 |
| SRR2868004 | Drought Stress (root) | 5.607 |
| SRR2967015 | Control (root) | 6.371 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.037 |
| SRR9715740 | Leaf | 1.810 |
| SRR9715741 | Leaf | 1.673 |
| SRR9715739 | Root | 0.769 |
| SRR9715742 | Root | 2.010 |
| SRR9715743 | Root | 1.423 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.291 |
| SRR8749028 | MeJA induced 9h | 10.447 |
| SRR8749029 | MeJA induced 9h | 8.447 |
| SRR8749030 | Uninduced | 2.633 |
| SRR8749031 | Uninduced | 1.321 |
| SRR8749032 | Uninduced | 1.219 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.344 |
| SRR8400027 | Control - Root | 8.912 |