Gene detail information of Glyur001276s00037533 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KHN26061.1 | 1.17E-24 | hypothetical protein glysoja_025159 [Glycine soja] |
| trEMBL | tr|I1LW18|I1LW18_SOYBN | 4.00E-25 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G02220.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01276 | 45137 | 45406 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.621 |
| SRR1783600 | control | 3.471 |
| SRR1783602 | moderate drought stress | 0.647 |
| SRR1811619 | moderate drought stress | 0.838 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 92.612 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 88.941 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.049 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.675 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 516.860 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 520.960 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 30.108 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 31.148 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 33.408 |
| SRR2868004 | Drought Stress (root) | 199.954 |
| SRR2967015 | Control (root) | 72.133 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 415.769 |
| SRR9715740 | Leaf | 405.874 |
| SRR9715741 | Leaf | 521.513 |
| SRR9715739 | Root | 36.244 |
| SRR9715742 | Root | 93.982 |
| SRR9715743 | Root | 90.404 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 530.026 |
| SRR8749028 | MeJA induced 9h | 582.930 |
| SRR8749029 | MeJA induced 9h | 1349.245 |
| SRR8749030 | Uninduced | 597.069 |
| SRR8749031 | Uninduced | 1014.225 |
| SRR8749032 | Uninduced | 744.859 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 33.915 |
| SRR8400027 | Control - Root | 51.341 |