Gene detail information of Glyur001276s00037529 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G18810.1 | 9.00E-07 | Protein kinase superfamily protein |
| NR | CDM80064.1 | 5.54E-07 | unnamed protein product [Triticum aestivum] |
| Swissprot | tr|Q9LS95|PERK6_ARATH | 2.00E-07 | Putative proline-rich receptor-like protein kinase PERK6 |
| trEMBL | tr|A0A077RR69|A0A077RR69_WHEAT | 2.00E-07 | Chromosome 3B, genomic scaffold, cultivar Chinese Spring {ECO:0000313|EMBL:CDM80064.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01276 | 33476 | 35494 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 38.092 |
| SRR1783600 | control | 39.114 |
| SRR1783602 | moderate drought stress | 101.947 |
| SRR1811619 | moderate drought stress | 84.975 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 25.382 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 30.312 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 43.557 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 44.417 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 33.221 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 35.543 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 16.445 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.181 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.015 |
| SRR2868004 | Drought Stress (root) | 24.012 |
| SRR2967015 | Control (root) | 24.891 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 12.362 |
| SRR9715740 | Leaf | 12.531 |
| SRR9715741 | Leaf | 16.573 |
| SRR9715739 | Root | 3.102 |
| SRR9715742 | Root | 5.434 |
| SRR9715743 | Root | 4.808 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 27.176 |
| SRR8749028 | MeJA induced 9h | 23.770 |
| SRR8749029 | MeJA induced 9h | 31.238 |
| SRR8749030 | Uninduced | 38.895 |
| SRR8749031 | Uninduced | 28.205 |
| SRR8749032 | Uninduced | 30.470 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 42.377 |
| SRR8400027 | Control - Root | 35.864 |