Gene detail information of Glyur001274s00032043 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G80160.1 | 2.00E-56 | Lactoylglutathione lyase / glyoxalase I family protein |
| NR | XP_004508519.1 | 2.63E-90 | PREDICTED: uncharacterized protein YwkD-like [Cicer arietinum] |
| COG | YP_004537359.1 | 3.00E-16 | glyoxalase/bleomycin resistance protein/dioxygenase [Thioalkalimicrobium cyclicum ALM1] |
| trEMBL | tr|C6SWK3|C6SWK3_SOYBN | 4.00E-88 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU13626.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01274 | 12955 | 14359 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001274s00032043.1 | PF12681.2 | Glyoxalase_2 | 16 | 129 | 1.10E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.009 |
| SRR1783600 | control | 0.045 |
| SRR1783602 | moderate drought stress | 0.031 |
| SRR1811619 | moderate drought stress | 0.051 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 13.086 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 12.232 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.002 |
| SRR2868004 | Drought Stress (root) | 1.995 |
| SRR2967015 | Control (root) | 1.008 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.308 |
| SRR9715740 | Leaf | 0.207 |
| SRR9715741 | Leaf | 0.814 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.083 |
| SRR9715743 | Root | 0.052 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.227 |
| SRR8749028 | MeJA induced 9h | 2.777 |
| SRR8749029 | MeJA induced 9h | 0.942 |
| SRR8749030 | Uninduced | 101.520 |
| SRR8749031 | Uninduced | 84.888 |
| SRR8749032 | Uninduced | 31.605 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.544 |
| SRR8400027 | Control - Root | 2.119 |