Gene detail

Gene detail information of Glyur001274s00032041.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G26830.1	1.00E-140	Protein kinase superfamily protein
NR	KHN35895.1	0	Putative ethanolamine kinase A [Glycine soja]
COG	YP_923781.1	5.00E-13	choline/ethanolamine kinase [Nocardioides sp. JS614]
Swissprot	tr\|O81024\|EKI_ARATH	1.00E-173	Probable ethanolamine kinase
trEMBL	tr\|K7KWH7\|K7KWH7_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA06G24820.3}

Sequence

Transcript Sequence

>Glyur001274s00032041.1
ATGACGTGTGGTGGTGGGGCCCATATTGGTCATTTCATACGACAAGTAAACAAAACAAAACAATCCCCCAACGCCACAGGACACCGCTCGATTCGAAAGAAAAAGGGGAACAAAAACAAATTAACTAACGATTTGATTCGATTCCGTCACCACCACCATTTCACACACACACACACACACCATTCACCTCTTTTTCATCAAACTCCAAACTCTTTCTTCACTTCCCCATTTCGTTGCACTTTGAAACCATCCTCCTCCTTGGTTCGATTCATTCAGTCGCATTTAATAATGGGTGCAGAAGTTAAGATCTGGAATCCCGTNGAAGTCGCAGAGCAAGCTCGCAAAGACTACGCGTCGCAGATTCATCCCTCTCATCTTACCATTGATCCCTCTCTCTCCCTTCCTCAAATGAAACCTCTCGTCCTTAAGTTGTGCAAGGACATGTTCAAGGCCTGGTCAAATTTGGATGATTCTTGCTTTCATGTTGAGAAGATTTCTGGAGGCATAACAAATTTGTTACTGAAGGTTTCGGTTAAGCAAGGAAATTGTATCAATGACATTATAACCATCAGATTGTATGGACCGAACACTGAGTACATTATCGATCGTCAGCGAGAATTGCAGGCCACCAAATACATCACAGCTGCAGGATTTGGTGCAAAGTGGCTTGGAATATTTGGAAATGGCATGGTGCAATCTTTTATTAATGCGCATACACTAACTCCATCAGATATGCGGGAGCCAAAGCTGGCTGCTAAAATAGCCAAACAACTTCGAATATTTCATCATGTGGAAATTCCAGGTTCTAAGGAACCTCAACTATGGAATGATATCTGGAAGTTTTTTGAGAAAGCATCTGTTCTAGAATTTGATGATAATAAAAAGCAGAAGACTTATGAGGCGATTTCATTCAGGGAAGTTCATGATGAAATTCTCGAGCTCAAGGGGTTGTGTGATCGTCTCAANTCTCCTGTAATTTTTGCTCACAATGACTTGCTTTCTGGAAACATAATGATTAATCATGAGGAAGATAAACTTTACTTCATTGATTATGAATATGCATCATACAACTACAGAGGCTATGATATAGGGAACCACTTTGCAGAATATGCTGGCTTTGACTGTGACTACGACTTGTACCCAAATATGAATGAACAATATCATTTCTTCCGGCATTACTTACAGCCTGACAGACCACAGGAGGTGTCTAAGAAAGATCTTGAAACTTTGTATGTTGAGGCAAATACATATGCACTGGCCTCACACCTTTTCTGGGCATTGTGGGGGCTAATTCAGGCAAAGATGTCCCCGATCGATTTCGATTATCTNGGTTACTTTTTCCTTCGATACAACGAGTTCAAAAGGCAGAAAGAAAAGTACTTATTGCTGGCGCAATCTCACCTTTCAGTATGCAGGAATGAGTAGATAGATGATGTTTAATCGATCACTCATGAATTGATGTATGTCAAGTTTGTAGCACGAGGCCCCTGATTCCGGTAGTTAAATGTTGTGTAAAATATCTTTTGTAGACGCTTATCACAATAAAGGCAAATTTAAGCATTTAGTTTGAGCTCTGGTGGCTCTTCTTGTTGTAATCCAGAGCTCTGGTGGCTCTTCTTGTTGTAATCCAGAAACTTGATCTATCATTCTTTCTCACTGTATTGTGATCGTTACAAATTTTGGTCTGCTATATCTTTATCTCTTTCGTCTTTATTTGTC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01274	2147	10036	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K00894	ETNK, EKI	EC:2.7.1.82	Glycerophospholipid metabolism	map00564

Gene Ontology

molecular_function
GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001274s00032041.1	PF01633.15	Choline_kinase	188	384	1.10E-61

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	11.374
SRR1783600	control	11.614
SRR1783602	moderate drought stress	6.990
SRR1811619	moderate drought stress	6.940

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	11.225
DRR006520	Root Summer glycyrrhizin high producing strain	10.766
DRR006521	Root Winter glycyrrhizin high producing strain	12.681
DRR006522	Root Winter glycyrrhizin high producing strain	12.241
DRR006523	Root Summer glycyrrhizin low producing strain	12.298
DRR006524	Root Summer glycyrrhizin low producing strain	12.238
DRR006525	Leaf Summer glycyrrhizin high producing strain	23.601
DRR006526	Leaf Summer glycyrrhizin high producing strain	23.281

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	28.232
SRR2868004	Drought Stress (root)	24.786
SRR2967015	Control (root)	20.914

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	20.080
SRR9715740	Leaf	23.779
SRR9715741	Leaf	22.678
SRR9715739	Root	2.893
SRR9715742	Root	5.588
SRR9715743	Root	4.749

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	14.634
SRR8749028	MeJA induced 9h	22.820
SRR8749029	MeJA induced 9h	13.190
SRR8749030	Uninduced	15.560
SRR8749031	Uninduced	11.150
SRR8749032	Uninduced	5.117

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	18.137
SRR8400027	Control - Root	20.081