Gene detail

Gene detail information of Glyur001271s00028149

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT3G44050.1	P-loop containing nucleoside triphosphate hydrolases superfamily protein
NR	XP_004487433.1	PREDICTED: kinesin-like protein KIF15-like [Cicer arietinum]
Swissprot	tr\|Q27IK6\|POK2_ARATH	Phragmoplast orienting kinesin 2
trEMBL	tr\|G7IRI6\|G7IRI6_MEDTR	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}

Sequence

Transcript Sequence

>Glyur001271s00028149.1
ATGCCGTTCCTATCCGAGGCTGCCAGTGCAATCAAGAGCAGGTTCGGGTTCCATGACCACCATCACTCCGAATCACTTTCGCTGATTCAGAACACTCCGGATCTTCTGAAATCCGCGGCCAAAGACAATCTCNCTCAGAGCTCTGTACTTCGAAACATCAACGATTGGGACGATGAAAGTGTAGTTGGACCAAGTAGCACTGCGGTTTCGTCCAGCCAGAGCTTTGAATTATGCGAGGATCCTTCCTTCTGGAAAGATCACAACGTGCAGGTTATAATTAGAATGCGCCCTCTTAGCAATACTGAGATATCGTTGCAAGGGCACGGCAAATGTGTTAGGCAAGAGAGTTGTCACACAATTACTTGGACTGGACATCCTGAGTCACGATTTACTTTTGATCTTGTTGCAGACGAGAANGAGAAGCTCTTTAAAGTAGCTGGTTTACCGATGGTAGAAAATTGCATGGGAGGCTACAACAGCTGCATGTTTGCTTATGGCCAAACTGGAAGTGGGAAGACCCACACCATGCTCGGTGACATTGAGGGGGGAACTAGAAGACACAGTGTCAACTGTGGGATGACACCAAGAATTTTTGAGCACTTATTTTCTAGAATTCAGAAGGAAAAAGAGGCTCGTAGAGATGAAAAGTTAAAATTCACATGTAAATGTTCTTTCTTGGAGATATACAATGAACAGATCCTTGATCTTTTGGACCCGTCATCTAACAATCTGCAGATAAGAGAAGACAGCAAGAAAGGAGTTTATGTGGAAAATCTTAAGGAAGTAGAAGCTACTAATGCTCGAGATGTCATACAACTACTTATGCAGGGTGCTGCAAACAGAAAGGTAGCTGCTACTAATATGAATCGTGCCAGCAGTCGTTCTCATAGTGTATTTACTTGCATCATTGAGAGTCANTGGGAATCTCAAGGAGTAACTCACTTTCGATTTGCTCGACTTAATCTTGTTGATTTGGCTGGATCTGAGAGGCAGAAGAGTTCTGGTGCTGAAGGGGANCGCCTCAAGGAAGCTACTAATATCAACAAGTCTCTTTCAACCTTGGGGCTTGTGATTATGAACCTAGTAAGTATATCTAACGGGAAGTCACACCACGTTCCTTACCGTGATTCAAAGCTCACATTTTTACTTCAGGATTCTCTTGGAGGGAATTCAAAAACGATCATAATTGCAAACATAAGCCCCTCCATTTGTTGTTCGCTTGAGACATTAAGCACATTGAAGTTCGCACAACGTGCTAAATTTATCAAGAACAATGCCNTTGTAAATGAGGATGCATCTGGAGATGTCATTGCCATGAGACTCCAAATTCAACAACTTAAGAAAGAANTATCCCGCTTACGAGGTCTAGCTGGTGGAGGAGAAATTCAGGATAATGACATGTCAGTAATTAGCCTTCCGGGTTCTCCAGTATCCTTCAAGTGGGAGGGTGCTCAAGGATCATTCAGTCCATTAGCCTCTGTTAAAAGGATATCTCAGAAAAAAGACATTGAAATTGCCCTTGTTGGGGCCTTTAGGAGGGAGAAGGACAAAGAGATTGCATTGCAGGCATTGAGAGAAGAAAATCAAGCGGCCATGAAGCTGGCCAAACAAAGGGAAGACGAGATACAAGGTCTGAAGATGAGGCTCCGATTTCGNGAAGCTGGAATAAAAAGGTTAGAAGCAGTTGCTTCTGGGAAGATATCAGCCGAGACACACTTGCTGAATGAGAAAGAGGAGCATTTGAAGGAAATTGAGGTCCTGCGGGCCCAGGTGGATCGAAGTCAAGAAGTAACAAGATTTGCTATGGAAAATTTGCAGCTGAAAGAAGAAATTAGAAGGCATTCATTTTATGAAGGAGGTGAACGGGAAATGATGAATGAACAGATTATGGTTCTCCAAAACAAGTTGTTAGAAGCACTGGATTGGAAATTTATGCACGAACCAGATCCGAAAACAAATTTTGACTCGATGATGGAAGACGGAAATAGTGATGGTGATCTTATTTCAAAACAGGAGCCAANTCCAAAATCACGTTGGCAGTCTTCTCTTAGGGAGGAAAATGAGTTTCTCCGCATCCAGGCTATTCAAAACCAGGCAGAAATGGACACAATTCGAAAGAAGCTAGAGGTTTGCCTTGGAGAGAGAGAAAAATTGGAAAGGCAACTTGATGATTTGAAAGCAAAATTTGAACAAGAGAAATCCCAAACAAGNGAAACAACTAAAGAAGGAGGAGAGCAAATTGACCTTCCATCAACAAATGATACGCCTGTCATTAACATCAATGACCAACTGGAATTGAAAACAATGGTTGATGCTATTGCTGCTGCTAGTCAAAGAGAAGCAGAGGCTCACGAGACAGCAATTATGCTGTCAAAGGAGAACGATGAACTAAGGATGAAGCTTAAAGCCTTGATTGAGGATAACAGTAAATTAATTGAATTGTATGAACAAGCTACTGCTGAAAATAACAATAGATATATTACTACAGGGGAGAATGCTCAAGAAATTGGTTCCAAGGTTGACAATGGTTTCCATCTTGAAAACAGAGAAGAGGAAACCAAGTTGAAAAGAGTGGTTGAGAATCTTCAGCATCAGCTCATGGAATTGAATGAAGAAAACGAAAAGTTGATGAGTTTGTATGAAAGAGCCATGCAGGAGAGGGATGATCTTAAAAGAACTCTTTCATTTTCTGAACATGAAAGAGTTGAAACCAAAGGAGAAATGGACTGCCCAGAAAAGCTTGTTGAAGTTGANGGAGGGGAAAGAGACTCAAGAGTAGAAACTATTTCCCTGGAAGCGCAGGGTATAGGTGAAAGTAGATACGTTAACAAACCTACTATATCTGGGTCTGATTTATGCCTCGAGTCTGATGCACATGAAGAAGAAAAGCTTTTAAAAGATGAGAATGAGGTCGATGTTCTGGTCAACTCTGAAAAAGACACTGAGGAGGTATCAAATCTCATTGTGGAAAAGTTATCAAAGGAATTAAATTGTGCTAGAGAGAAGCTTGAAGGAGTTGATGGACAAATCTTGAATGCTGTCAGAACTCTAGCTTCGCTTGGCTGTGCTGAGAAAGCAATAGTCCAGGTTGAAAATTTCTCTAGAGAAATTGAAGTTATAGAACATGATATTCAGGTCAAGCGTCAGCAGTTTGAATCCTTGAATCTTATGCTGTATGAAGCACAGAAAAGAAGAGCTCTAGTTGATAAAAAGTTATCTGCGCTCAAATATTCATTATCAAACTTTTCCTTGTCGTTTTCTTATTTTGAGCAACGGGAGGCAAGGGCAAGAGCAGGGGTGAAANACTTGACATCTCGTCTTGACCGAAAGAAAGGGGAATTGGTTGCTCTTCAAGCTTCCAAGGAGGGGTTGGAGAATGCTATAAAAAAAAACCAAGAATCTGAAGCTGAATTAACGAAAAATATTGCATGCATCAAATCCAAACTGGAGGAAGAGAATCGCAAGCGTGAAGGTGAAAAGGTTCTCTTTGCAATTGATAACACACAGAATGTAGATTCCTCACTGAAAACTTGGCAACTTGGTGTTAAAGCCACCGATTTACTTAAGTTAGAAGAAGAGAAAACGAAGCTGCAAGCAGAGATGAAGCTTTCTCAAGAAAAACTCGGGGTTATAAGAAAGGAAGTGGGAAATCTAAACAAGAAGGTGGCAAGTGTGGATAGTCAGATACAAGCTGTTCAACTGGAAATACAGCAAGGTTTGAGGAACACACAGGAAAAGGAGCTTGCACTTCAACGTGTGATGAAAGAAAAAGAGATGCTCTTGGAGTTTAGAGATAATGGAATGCTTGAAATAGAGCATTTGATCATTGATCTCCATCAGTATGTGTTTGAATATGATCTAAAGGAGGCTGAAACGAANATGCTAGGGGAAGAATTGCAAATAGATTTTTTAAGAGCCGAAGAGTTACAGACAGCCAGGGTCATTGCTGCAGAGAACAAAAACAATTTCTTTTNTTCCATGCCTTATTTAGGCATGTCTGAGAAGATAGAGGAGCAGATGCAAAATCTACGGGCATCTATTCTGGAGACGAAGTTATTGTTGGAAGGCATTTCCCATGCCACNTGA

Protein Sequence

>Glyur001271s00028149.1
MPFLSEAASAIKSRFGFHDHHHSESLSLIQNTPDLLKSAAKDNLXQSSVLRNINDWDDESVVGPSSTAVSSSQSFELCEDPSFWKDHNVQVIIRMRPLSNTEISLQGHGKCVRQESCHTITWTGHPESRFTFDLVADEXEKLFKVAGLPMVENCMGGYNSCMFAYGQTGSGKTHTMLGDIEGGTRRHSVNCGMTPRIFEHLFSRIQKEKEARRDEKLKFTCKCSFLEIYNEQILDLLDPSSNNLQIREDSKKGVYVENLKEVEATNARDVIQLLMQGAANRKVAATNMNRASSRSHSVFTCIIESXWESQGVTHFRFARLNLVDLAGSERQKSSGAEGXRLKEATNINKSLSTLGLVIMNLVSISNGKSHHVPYRDSKLTFLLQDSLGGNSKTIIIANISPSICCSLETLSTLKFAQRAKFIKNNAXVNEDASGDVIAMRLQIQQLKKEXSRLRGLAGGGEIQDNDMSVISLPGSPVSFKWEGAQGSFSPLASVKRISQKKDIEIALVGAFRREKDKEIALQALREENQAAMKLAKQREDEIQGLKMRLRFREAGIKRLEAVASGKISAETHLLNEKEEHLKEIEVLRAQVDRSQEVTRFAMENLQLKEEIRRHSFYEGGEREMMNEQIMVLQNKLLEALDWKFMHEPDPKTNFDSMMEDGNSDGDLISKQEPXPKSRWQSSLREENEFLRIQAIQNQAEMDTIRKKLEVCLGEREKLERQLDDLKAKFEQEKSQTXETTKEGGEQIDLPSTNDTPVININDQLELKTMVDAIAAASQREAEAHETAIMLSKENDELRMKLKALIEDNSKLIELYEQATAENNNRYITTGENAQEIGSKVDNGFHLENREEETKLKRVVENLQHQLMELNEENEKLMSLYERAMQERDDLKRTLSFSEHERVETKGEMDCPEKLVEVXGGERDSRVETISLEAQGIGESRYVNKPTISGSDLCLESDAHEEEKLLKDENEVDVLVNSEKDTEEVSNLIVEKLSKELNCAREKLEGVDGQILNAVRTLASLGCAEKAIVQVENFSREIEVIEHDIQVKRQQFESLNLMLYEAQKRRALVDKKLSALKYSLSNFSLSFSYFEQREARARAGVKXLTSRLDRKKGELVALQASKEGLENAIKKNQESEAELTKNIACIKSKLEEENRKREGEKVLFAIDNTQNVDSSLKTWQLGVKATDLLKLEEEKTKLQAEMKLSQEKLGVIRKEVGNLNKKVASVDSQIQAVQLEIQQGLRNTQEKELALQRVMKEKEMLLEFRDNGMLEIEHLIIDLHQYVFEYDLKEAETXMLGEELQIDFLRAEELQTARVIAAENKNNFFXSMPYLGMSEKIEEQMQNLRASILETKLLLEGISHAT

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01271	44152	53875	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0007018 microtubule-based movement

cellular_component
GO:0005871 kinesin complex

molecular_function

GO:0003777 microtubule motor activity

GO:0005524 ATP binding

GO:0008017 microtubule binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001271s00028149.1	PF00225.18	Kinesin	94	421	1.80E-106
Glyur001271s00028149.1	PF12711.2	Kinesin-relat_1	552	636	2.10E-23

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.148
SRR1783600	control	2.286
SRR1783602	moderate drought stress	1.362
SRR1811619	moderate drought stress	1.445

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	3.749
DRR006520	Root Summer glycyrrhizin high producing strain	3.840
DRR006521	Root Winter glycyrrhizin high producing strain	0.191
DRR006522	Root Winter glycyrrhizin high producing strain	0.213
DRR006523	Root Summer glycyrrhizin low producing strain	1.153
DRR006524	Root Summer glycyrrhizin low producing strain	1.047
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.432
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.446

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	12.706
SRR2868004	Drought Stress (root)	6.417
SRR2967015	Control (root)	6.980

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1.442
SRR9715740	Leaf	0.206
SRR9715741	Leaf	0.489
SRR9715739	Root	0.192
SRR9715742	Root	0.783
SRR9715743	Root	0.593

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	16.571
SRR8749028	MeJA induced 9h	22.338
SRR8749029	MeJA induced 9h	10.210
SRR8749030	Uninduced	1.313
SRR8749031	Uninduced	0.451
SRR8749032	Uninduced	1.134

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	6.492
SRR8400027	Control - Root	5.187