Gene detail information of Glyur001271s00028144 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G05070.1 | 3.00E-56 | Protein of unknown function (DUF1068) |
| NR | XP_007149990.1 | 1.30E-100 | hypothetical protein PHAVU_005G116600g [Phaseolus vulgaris] |
| trEMBL | tr|V7BVK0|V7BVK0_PHAVU | 5.00E-101 | Uncharacterized protein {ECO:0000313|EMBL:ESW21984.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01271 | 11643 | 14593 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001271s00028144.1 | PF06364.7 | DUF1068 | 10 | 178 | 4.00E-78 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.375 |
| SRR1783600 | control | 11.629 |
| SRR1783602 | moderate drought stress | 14.903 |
| SRR1811619 | moderate drought stress | 14.390 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.784 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.855 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 16.986 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 16.663 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 22.421 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 22.847 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.380 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.368 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 17.193 |
| SRR2868004 | Drought Stress (root) | 15.657 |
| SRR2967015 | Control (root) | 16.801 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.351 |
| SRR9715740 | Leaf | 5.374 |
| SRR9715741 | Leaf | 5.980 |
| SRR9715739 | Root | 5.259 |
| SRR9715742 | Root | 5.340 |
| SRR9715743 | Root | 6.041 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 38.756 |
| SRR8749028 | MeJA induced 9h | 32.240 |
| SRR8749029 | MeJA induced 9h | 26.979 |
| SRR8749030 | Uninduced | 28.360 |
| SRR8749031 | Uninduced | 10.526 |
| SRR8749032 | Uninduced | 13.045 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.171 |
| SRR8400027 | Control - Root | 10.997 |