Gene detail information of Glyur001268s00035618 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G17880.1 | 2.00E-11 | Basic helix-loop-helix (bHLH) DNA-binding family protein |
| NR | XP_003612909.1 | 2.73E-21 | BHLH transcription factor [Medicago truncatula] |
| Swissprot | tr|O49687|MYC4_ARATH | 2.00E-14 | Transcription factor MYC4 |
| trEMBL | tr|G7KF32|G7KF32_MEDTR | 1.00E-21 | Basic helix loop helix (BHLH) family transcription factor {ECO:0000313|EMBL:AES95867.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01268 | 65869 | 66168 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.032 |
| SRR1783600 | control | 0.123 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.063 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.708 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.242 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.124 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.279 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.070 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.940 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.977 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.144 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.054 |
| SRR2868004 | Drought Stress (root) | 0.637 |
| SRR2967015 | Control (root) | 0.922 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.733 |
| SRR9715740 | Leaf | 0.724 |
| SRR9715741 | Leaf | 0.970 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.103 |
| SRR9715743 | Root | 0.070 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.009 |
| SRR8400027 | Control - Root | 0.141 |