Gene detail information of Glyur001265s00034990 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G71710.1 | 4.00E-160 | DNAse I-like superfamily protein |
| NR | XP_004489918.1 | 0 | PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase 1-like isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q84MA2|IP5P1_ARATH | 0 | Type I inositol 1,4,5-trisphosphate 5-phosphatase 1 |
| trEMBL | tr|K7MHP0|K7MHP0_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G27760.4} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01265 | 55496 | 65627 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001265s00034990.1 | PF03372.18 | Exo_endo_phos | 389 | 587 | 2.80E-20 |
| Glyur001265s00034990.2 | PF03372.18 | Exo_endo_phos | 374 | 572 | 2.70E-20 |
| Glyur001265s00034990.3 | PF03372.18 | Exo_endo_phos | 374 | 572 | 2.70E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.831 |
| SRR1783600 | control | 7.973 |
| SRR1783602 | moderate drought stress | 7.618 |
| SRR1811619 | moderate drought stress | 7.698 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.103 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.934 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 23.083 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 23.033 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.787 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.944 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.556 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.315 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.042 |
| SRR2868004 | Drought Stress (root) | 19.663 |
| SRR2967015 | Control (root) | 12.268 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 15.628 |
| SRR9715740 | Leaf | 25.245 |
| SRR9715741 | Leaf | 25.349 |
| SRR9715739 | Root | 0.904 |
| SRR9715742 | Root | 4.884 |
| SRR9715743 | Root | 4.510 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.340 |
| SRR8749028 | MeJA induced 9h | 6.958 |
| SRR8749029 | MeJA induced 9h | 3.151 |
| SRR8749030 | Uninduced | 5.368 |
| SRR8749031 | Uninduced | 8.510 |
| SRR8749032 | Uninduced | 3.514 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.741 |
| SRR8400027 | Control - Root | 7.584 |