Gene detail

Gene detail information of Glyur001265s00034988.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G26030.2	3.00E-156	ferrochelatase 1
NR	KHN29732.1	0	Ferrochelatase-2, chloroplastic [Glycine soja]
COG	YP_007167757.1	7.00E-138	ferrochelatase [Halothece sp. PCC 7418]
Swissprot	tr\|P42044\|HEMH_CUCSA	0	Ferrochelatase-2, chloroplastic (Precursor)
trEMBL	tr\|I1JTV8\|I1JTV8_SOYBN	0	Ferrochelatase {ECO:0000256\|RuleBase:RU000607}

Sequence

Transcript Sequence

>Glyur001265s00034988.1
GGATCAAAGTGGCTGTTCACTCACGTTCTGTCTCTCGTCCTTCTCGTCAGCCGCAGCTCTTCCTTCGACATCGTTGACGTCTCTCTAGTCTCAAGAACCCCAAATCCCCAAATCCTTCGCACGAACCCTAACTCCAATCGCAGGATCGCAGCATTTTCAGTAACTCCACGAACCCTAGATCCCAAATCTACCTCTCAGAGTTCGTTTCGAGCTTGCAAGTACTGCCCCAAACTCGATAGGAGTGAAGTTCTGGGTCTTAGTTTTTCTCTCAGATTTTCAGAAACTGCAAGGCTCTTTATGTCATGTTCTGATATCCGAAATGTTACCTATGTCACTTGCCACTCGGATTCGAACAAGTTTACAGCTCAAGCATCCTTGTTTTTGTGTCCTGGTTCGTCCAATAGAAGAATTGGCTTACTTGGGGAATCTTTTTGTTCGGATCCCTCTAGCAGGAGAAACATAGTTTGTCAGACATCTTATTCTGTGGATACGAGCACATATGATGGGGCTGCTTTAGAGTCTCTTTCTCATGTCACGGAAGAAAAAGTTGGTGTGTTGCTTCTCAATCTAGGAGGACCAGAGACACTGAATGATGTTCAACCCTTTCTGTTTAATCTTTTTGCAGACCCTGATATCATTCGTCTCCCAAGGTTGTTTCGGTTTCTCCAGCGACCACTGGCAAAATTGATTTCTGTGCTTCGGGCTCCTAAATCCAAGGAAGGGTATGCTGCTATTGGAGGTGGCTCTCCTTTGCGCAAAATTACAGATGACCAGGCACTTGCACTTAAACTGGCTTTGGAAGCAAAGGGCCTCTCTTCAAATGTCTATGTTGGGATGCGGTATTGGTACCCATTCACTGAAGAAGCAGCTCAGCAAATTAAGAGGGATGGAATAACAAGGCTTGTGGTGCTACCCCTTTATCCCCAGTTTTCTATATCCACAACTGGGTCAAGCATCCGTGTTCTGCAGCATATGTTCAGGGAAGATGCTTATTTGTCTAGGCTTCCTGTTTCCATTATAAACTCTTGGTATCAACGAGAAGGTTATATCAAGTCAATGGCTGACTTAATTGAGAAAGAGCTCCAGAAATTTTCTGAGCGAAAGGAGGTAACGATATTTTTCAGTGCCCACGGTGTACCTGTCAGTTACGTTGAGAATGCTGGGGATCCATACCTAGATCAAATGGAGGAGTGCATCTTCTTGATCATGAAGGAATTGAAGGCTAGAGGAATTAGTAGTGAGCACACTCTTGCTTATCAGAGTCGAGTAGGCCCTGTACAGTGGCTGAAGCCGTATATAGATGAAGTTCTTGTTGAGCTGGGCCAGAAAGGTGTGAGGAGTCTTTTAGCTGTTCCAGTGAGCTTTGTGAGTGAGCACATTGAGACCCTTGAAGAAATTGACATGGAGTACAAGGAGTTGGCTCTTGAATCTGGCATCAAGAATTGGGAACGTGTCCCTGTCCTTGGTGTTACCCCTTCCTTCATTACAGATCTGGCAGATGCAGTAATAGAAGCTCTCCCATTGGCAGCAGCAATGTATGCGCCGACCAGCACCACTGAAGATGATGATGATCAAGAC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01265	6800	19597	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K01772	hemH, FECH	EC:4.99.1.1 4.99.1.9	Porphyrin and chlorophyll metabolism	map00860

Gene Ontology

biological_process
GO:0006783 heme biosynthetic process

molecular_function
GO:0004325 ferrochelatase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001265s00034988.1	PF00762.14	Ferrochelatase	182	505	7.50E-109

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	6.711
SRR1783600	control	6.984
SRR1783602	moderate drought stress	10.572
SRR1811619	moderate drought stress	9.886

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	7.846
DRR006520	Root Summer glycyrrhizin high producing strain	6.739
DRR006521	Root Winter glycyrrhizin high producing strain	10.447
DRR006522	Root Winter glycyrrhizin high producing strain	10.419
DRR006523	Root Summer glycyrrhizin low producing strain	13.480
DRR006524	Root Summer glycyrrhizin low producing strain	13.445
DRR006525	Leaf Summer glycyrrhizin high producing strain	4.815
DRR006526	Leaf Summer glycyrrhizin high producing strain	4.071

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	9.103
SRR2868004	Drought Stress (root)	10.343
SRR2967015	Control (root)	12.183

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	9.041
SRR9715740	Leaf	15.003
SRR9715741	Leaf	11.104
SRR9715739	Root	2.725
SRR9715742	Root	7.239
SRR9715743	Root	5.795

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	11.510
SRR8749028	MeJA induced 9h	15.114
SRR8749029	MeJA induced 9h	8.684
SRR8749030	Uninduced	11.787
SRR8749031	Uninduced	5.339
SRR8749032	Uninduced	6.172

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	17.585
SRR8400027	Control - Root	15.982