Gene detail information of Glyur001263s00024664 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G27690.1 | 1.00E-21 | Heavy metal transport/detoxification superfamily protein |
| NR | ACU23628.1 | 7.56E-101 | unknown [Glycine max] |
| Swissprot | tr|Q9SZN7|HIP26_ARATH | 3.00E-12 | Heavy metal-associated isoprenylated plant protein 26 (Precursor) |
| trEMBL | tr|C6TL38|C6TL38_SOYBN | 3.00E-101 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU23628.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01263 | 53962 | 56088 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001263s00024664.1 | PF00403.21 | HMA | 27 | 79 | 7.80E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 317.170 |
| SRR1783600 | control | 317.851 |
| SRR1783602 | moderate drought stress | 618.251 |
| SRR1811619 | moderate drought stress | 615.421 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 978.261 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 967.201 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.127 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.124 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 957.607 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 958.898 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 17.276 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 17.512 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 113.109 |
| SRR2868004 | Drought Stress (root) | 296.094 |
| SRR2967015 | Control (root) | 219.733 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.168 |
| SRR9715740 | Leaf | 13.414 |
| SRR9715741 | Leaf | 19.044 |
| SRR9715739 | Root | 49.587 |
| SRR9715742 | Root | 134.532 |
| SRR9715743 | Root | 119.578 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.038 |
| SRR8749029 | MeJA induced 9h | 0.070 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.044 |
| SRR8749032 | Uninduced | 0.130 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 213.033 |
| SRR8400027 | Control - Root | 264.127 |