Gene detail information of Glyur001263s00024662 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_007163094.1 | 1.69E-12 | hypothetical protein PHAVU_001G205700g, partial [Phaseolus vulgaris] |
| trEMBL | tr|V7D0B0|V7D0B0_PHAVU | 6.00E-13 | Uncharacterized protein {ECO:0000313|EMBL:ESW35088.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01263 | 39914 | 40180 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.509 |
| SRR1783600 | control | 0.352 |
| SRR1783602 | moderate drought stress | 0.450 |
| SRR1811619 | moderate drought stress | 0.239 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.476 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.695 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.782 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 18.556 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.863 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.833 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.709 |
| SRR2868004 | Drought Stress (root) | 6.375 |
| SRR2967015 | Control (root) | 1.674 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.492 |
| SRR9715740 | Leaf | 0.509 |
| SRR9715741 | Leaf | 1.676 |
| SRR9715739 | Root | 4.011 |
| SRR9715742 | Root | 5.737 |
| SRR9715743 | Root | 5.524 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.907 |
| SRR8749028 | MeJA induced 9h | 0.157 |
| SRR8749029 | MeJA induced 9h | 0.210 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.417 |
| SRR8400027 | Control - Root | 1.065 |