Gene detail information of Glyur001259s00024413 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G37080.3 | 2.00E-153 | Protein of unknown function, DUF547 |
| NR | AES94740.2 | 0 | transcription factor [Medicago truncatula] |
| trEMBL | tr|G7K815|G7K815_MEDTR | 0 | Transcription factor {ECO:0000313|EMBL:AES94740.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01259 | 24993 | 29493 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001259s00024413.1 | PF14389.1 | Lzipper-MIP1 | 63 | 144 | 4.30E-23 |
| Glyur001259s00024413.1 | PF04784.9 | DUF547 | 406 | 538 | 2.00E-34 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.183 |
| SRR1783600 | control | 0.183 |
| SRR1783602 | moderate drought stress | 0.766 |
| SRR1811619 | moderate drought stress | 0.754 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.297 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.344 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.204 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.246 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.201 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.225 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.402 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.489 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.923 |
| SRR2868004 | Drought Stress (root) | 1.268 |
| SRR2967015 | Control (root) | 1.643 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.909 |
| SRR9715740 | Leaf | 6.292 |
| SRR9715741 | Leaf | 7.587 |
| SRR9715739 | Root | 0.023 |
| SRR9715742 | Root | 0.906 |
| SRR9715743 | Root | 1.071 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.083 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.474 |
| SRR8400027 | Control - Root | 0.499 |