Gene detail information of Glyur001254s00028551 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G06510.1 | 2.00E-51 | |
| NR | AET00395.2 | 3.79E-142 | hypothetical protein MTR_5g091560 [Medicago truncatula] |
| trEMBL | tr|G7KD67|G7KD67_MEDTR | 1.00E-142 | Uncharacterized protein {ECO:0000313|EMBL:AET00395.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01254 | 5585 | 8808 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.687 |
| SRR1783600 | control | 3.779 |
| SRR1783602 | moderate drought stress | 6.079 |
| SRR1811619 | moderate drought stress | 5.971 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.672 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.789 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.349 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.287 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.039 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.273 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.374 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.310 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.371 |
| SRR2868004 | Drought Stress (root) | 6.879 |
| SRR2967015 | Control (root) | 6.306 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.564 |
| SRR9715740 | Leaf | 22.198 |
| SRR9715741 | Leaf | 11.969 |
| SRR9715739 | Root | 1.396 |
| SRR9715742 | Root | 3.995 |
| SRR9715743 | Root | 2.298 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.160 |
| SRR8749028 | MeJA induced 9h | 5.061 |
| SRR8749029 | MeJA induced 9h | 3.610 |
| SRR8749030 | Uninduced | 1.419 |
| SRR8749031 | Uninduced | 0.518 |
| SRR8749032 | Uninduced | 0.840 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.619 |
| SRR8400027 | Control - Root | 7.230 |