Gene detail information of Glyur001250s00032713 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G54300.1 | 4.00E-18 | Protein of unknown function (DUF761) |
| NR | XP_006599709.1 | 2.18E-53 | PREDICTED: uncharacterized protein LOC102664248 [Glycine max] |
| trEMBL | tr|I1MQJ8|I1MQJ8_SOYBN | 8.00E-54 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G34150.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01250 | 49914 | 55646 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001250s00032713.1 | PF05553.6 | DUF761 | 141 | 176 | 5.00E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.809 |
| SRR1783600 | control | 1.505 |
| SRR1783602 | moderate drought stress | 0.577 |
| SRR1811619 | moderate drought stress | 0.798 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.447 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.362 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.197 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.416 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.817 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.220 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.516 |
| SRR2868004 | Drought Stress (root) | 16.999 |
| SRR2967015 | Control (root) | 13.628 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.305 |
| SRR9715740 | Leaf | 3.035 |
| SRR9715741 | Leaf | 2.554 |
| SRR9715739 | Root | 1.779 |
| SRR9715742 | Root | 2.496 |
| SRR9715743 | Root | 4.036 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.084 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.545 |
| SRR8400027 | Control - Root | 11.702 |