Gene detail information of Glyur001250s00032707 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G48405.1 | 3.00E-27 | Kinase interacting (KIP1-like) family protein |
| NR | KEH26860.1 | 0 | kinase interacting (KIP1-like) family protein [Medicago truncatula] |
| trEMBL | tr|A0A072UM28|A0A072UM28_MEDTR | 0 | Kinase interacting (KIP1-like) family protein {ECO:0000313|EMBL:KEH26860.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01250 | 1547 | 5144 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001250s00032707.1 | PF07765.7 | KIP1 | 39 | 105 | 5.80E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.166 |
| SRR1783600 | control | 4.206 |
| SRR1783602 | moderate drought stress | 2.513 |
| SRR1811619 | moderate drought stress | 2.396 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.209 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.941 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.283 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.184 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.105 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.329 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.199 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.096 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.150 |
| SRR2868004 | Drought Stress (root) | 5.501 |
| SRR2967015 | Control (root) | 4.181 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.182 |
| SRR9715740 | Leaf | 1.732 |
| SRR9715741 | Leaf | 3.784 |
| SRR9715739 | Root | 0.949 |
| SRR9715742 | Root | 1.405 |
| SRR9715743 | Root | 1.411 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 19.640 |
| SRR8749028 | MeJA induced 9h | 9.634 |
| SRR8749029 | MeJA induced 9h | 16.052 |
| SRR8749030 | Uninduced | 0.326 |
| SRR8749031 | Uninduced | 0.131 |
| SRR8749032 | Uninduced | 1.009 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.857 |
| SRR8400027 | Control - Root | 6.133 |