Gene detail information of Glyur001249s00034772 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | BAJ94873.1 | 2.29E-10 | predicted protein [Hordeum vulgare subsp. vulgare] |
| trEMBL | tr|F2DIF2|F2DIF2_HORVD | 9.00E-11 | Predicted protein {ECO:0000313|EMBL:BAJ94873.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01249 | 47577 | 48140 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.983 |
| SRR1783600 | control | 10.014 |
| SRR1783602 | moderate drought stress | 13.145 |
| SRR1811619 | moderate drought stress | 13.324 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.526 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.569 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 17.391 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 16.508 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.780 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.959 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 61.669 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 62.345 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.207 |
| SRR2868004 | Drought Stress (root) | 9.470 |
| SRR2967015 | Control (root) | 5.207 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 35.754 |
| SRR9715740 | Leaf | 61.568 |
| SRR9715741 | Leaf | 36.564 |
| SRR9715739 | Root | 9.461 |
| SRR9715742 | Root | 5.326 |
| SRR9715743 | Root | 7.525 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.856 |
| SRR8749028 | MeJA induced 9h | 2.392 |
| SRR8749029 | MeJA induced 9h | 2.437 |
| SRR8749030 | Uninduced | 1.739 |
| SRR8749031 | Uninduced | 0.011 |
| SRR8749032 | Uninduced | 0.674 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.044 |
| SRR8400027 | Control - Root | 4.643 |