Gene detail information of Glyur001242s00026112 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G31930.1 | 3.00E-47 | Mitochondrial glycoprotein family protein |
| NR | KEH39866.1 | 4.67E-97 | glycoprotein family protein [Medicago truncatula] |
| trEMBL | tr|A0A072VE84|A0A072VE84_MEDTR | 2.00E-97 | Glycoprotein family protein {ECO:0000313|EMBL:KEH39866.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01242 | 30089 | 32128 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001242s00026112.1 | PF02330.11 | MAM33 | 139 | 238 | 3.60E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.039 |
| SRR1783600 | control | 4.285 |
| SRR1783602 | moderate drought stress | 4.384 |
| SRR1811619 | moderate drought stress | 4.268 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.193 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.665 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.057 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.627 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.577 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.593 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.763 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.371 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.898 |
| SRR2868004 | Drought Stress (root) | 4.170 |
| SRR2967015 | Control (root) | 4.830 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.543 |
| SRR9715740 | Leaf | 3.837 |
| SRR9715741 | Leaf | 3.036 |
| SRR9715739 | Root | 2.075 |
| SRR9715742 | Root | 3.627 |
| SRR9715743 | Root | 2.239 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 16.371 |
| SRR8749028 | MeJA induced 9h | 7.908 |
| SRR8749029 | MeJA induced 9h | 10.582 |
| SRR8749030 | Uninduced | 2.989 |
| SRR8749031 | Uninduced | 4.383 |
| SRR8749032 | Uninduced | 3.254 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.472 |
| SRR8400027 | Control - Root | 8.986 |