Gene detail information of Glyur001236s00036110 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G18400.1 | 1.00E-13 | BR enhanced expression 1 |
| NR | KHN32051.1 | 5.94E-18 | Transcription factor BEE 3 [Glycine soja] |
| Swissprot | tr|Q8GZ13|BEE1_ARATH | 2.00E-17 | Transcription factor BEE 1 |
| trEMBL | tr|V7CA67|V7CA67_PHAVU | 2.00E-18 | Uncharacterized protein {ECO:0000313|EMBL:ESW26145.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01236 | 1245 | 5216 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.659 |
| SRR1783600 | control | 0.630 |
| SRR1783602 | moderate drought stress | 0.119 |
| SRR1811619 | moderate drought stress | 0.050 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.132 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.714 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.338 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.975 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.451 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.304 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.691 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.953 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.605 |
| SRR2868004 | Drought Stress (root) | 0.636 |
| SRR2967015 | Control (root) | 0.007 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.535 |
| SRR8400027 | Control - Root | 0.477 |