Gene detail information of Glyur001233s00029981 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G30480.3 | 1.00E-23 | |
| NR | XP_004500371.1 | 0 | PREDICTED: uncharacterized protein LOC101506096 isoform X1 [Cicer arietinum] |
| trEMBL | tr|A0A072UXG9|A0A072UXG9_MEDTR | 0 | Uncharacterized protein {ECO:0000313|EMBL:KEH34499.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01233 | 22657 | 31033 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.993 |
| SRR1783600 | control | 3.966 |
| SRR1783602 | moderate drought stress | 3.750 |
| SRR1811619 | moderate drought stress | 3.729 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.814 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.559 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.324 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.054 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.333 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.152 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.115 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.142 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.697 |
| SRR2868004 | Drought Stress (root) | 9.309 |
| SRR2967015 | Control (root) | 6.941 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.888 |
| SRR9715740 | Leaf | 0.501 |
| SRR9715741 | Leaf | 0.827 |
| SRR9715739 | Root | 0.086 |
| SRR9715742 | Root | 1.205 |
| SRR9715743 | Root | 1.065 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.450 |
| SRR8749028 | MeJA induced 9h | 16.990 |
| SRR8749029 | MeJA induced 9h | 10.489 |
| SRR8749030 | Uninduced | 13.569 |
| SRR8749031 | Uninduced | 14.945 |
| SRR8749032 | Uninduced | 7.531 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.724 |
| SRR8400027 | Control - Root | 7.561 |