Gene detail information of Glyur001232s00031533 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G28050.1 | 3.00E-95 | nodulin MtN21 /EamA-like transporter family protein |
| NR | XP_003543391.2 | 0 | PREDICTED: WAT1-related protein At5g40230-like isoform X1 [Glycine max] |
| Swissprot | tr|Q94JU2|WTR18_ARATH | 7.00E-116 | WAT1-related protein At3g28050 |
| trEMBL | tr|I1LWD5|I1LWD5_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G04360.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01232 | 49723 | 53385 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001232s00031533.1 | PF00892.15 | EamA | 26 | 154 | 2.10E-08 |
| Glyur001232s00031533.1 | PF00892.15 | EamA | 202 | 326 | 1.30E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 70.281 |
| SRR1783600 | control | 69.475 |
| SRR1783602 | moderate drought stress | 94.196 |
| SRR1811619 | moderate drought stress | 92.995 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 73.550 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 72.070 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 13.099 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 13.034 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 101.349 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 101.240 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 124.088 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 124.002 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 101.726 |
| SRR2868004 | Drought Stress (root) | 66.696 |
| SRR2967015 | Control (root) | 92.946 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 56.006 |
| SRR9715740 | Leaf | 100.649 |
| SRR9715741 | Leaf | 103.152 |
| SRR9715739 | Root | 22.378 |
| SRR9715742 | Root | 24.565 |
| SRR9715743 | Root | 24.625 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 20.774 |
| SRR8749028 | MeJA induced 9h | 28.779 |
| SRR8749029 | MeJA induced 9h | 18.576 |
| SRR8749030 | Uninduced | 16.971 |
| SRR8749031 | Uninduced | 6.322 |
| SRR8749032 | Uninduced | 5.084 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 111.208 |
| SRR8400027 | Control - Root | 93.780 |