Gene detail information of Glyur001232s00031530 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G14890.1 | 2.00E-27 | NHL domain-containing protein |
| NR | XP_004489306.1 | 7.44E-64 | PREDICTED: uncharacterized protein LOC101508916 [Cicer arietinum] |
| trEMBL | tr|A0A072UGJ4|A0A072UGJ4_MEDTR | 8.00E-60 | NHL domain protein {ECO:0000313|EMBL:KEH24880.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01232 | 27953 | 28426 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.871 |
| SRR1783600 | control | 8.333 |
| SRR1783602 | moderate drought stress | 14.305 |
| SRR1811619 | moderate drought stress | 11.943 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 67.579 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 52.113 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.345 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.551 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 33.205 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 32.827 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.709 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.662 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 31.380 |
| SRR2868004 | Drought Stress (root) | 17.222 |
| SRR2967015 | Control (root) | 30.174 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.165 |
| SRR9715740 | Leaf | 14.686 |
| SRR9715741 | Leaf | 5.055 |
| SRR9715739 | Root | 48.837 |
| SRR9715742 | Root | 26.126 |
| SRR9715743 | Root | 27.709 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 13.069 |
| SRR8749028 | MeJA induced 9h | 3.802 |
| SRR8749029 | MeJA induced 9h | 4.599 |
| SRR8749030 | Uninduced | 1.510 |
| SRR8749031 | Uninduced | 0.787 |
| SRR8749032 | Uninduced | 4.473 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 45.750 |
| SRR8400027 | Control - Root | 45.388 |