Gene detail information of Glyur001232s00031528 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G70280.2 | 7.00E-76 | NHL domain-containing protein |
| NR | XP_007151104.1 | 0 | hypothetical protein PHAVU_004G018200g [Phaseolus vulgaris] |
| trEMBL | tr|V7C157|V7C157_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW23098.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01232 | 22129 | 25534 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.801 |
| SRR1783600 | control | 3.700 |
| SRR1783602 | moderate drought stress | 2.982 |
| SRR1811619 | moderate drought stress | 2.955 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.452 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.355 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.203 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.199 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.385 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.253 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.564 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.373 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.093 |
| SRR2868004 | Drought Stress (root) | 3.244 |
| SRR2967015 | Control (root) | 3.195 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.678 |
| SRR9715740 | Leaf | 0.510 |
| SRR9715741 | Leaf | 0.146 |
| SRR9715739 | Root | 1.736 |
| SRR9715742 | Root | 2.457 |
| SRR9715743 | Root | 2.657 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.085 |
| SRR8749028 | MeJA induced 9h | 0.250 |
| SRR8749029 | MeJA induced 9h | 0.182 |
| SRR8749030 | Uninduced | 0.039 |
| SRR8749031 | Uninduced | 0.069 |
| SRR8749032 | Uninduced | 0.052 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.498 |
| SRR8400027 | Control - Root | 2.327 |