Gene detail

Gene detail information of Glyur001232s00031527

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G14880.1	0	Potassium transporter family protein
NR	XP_006603819.1	0	PREDICTED: potassium transporter 8-like [Glycine max]
COG	YP_159072.1	2.00E-103	potassium uptake protein [Aromatoleum aromaticum EbN1]
Swissprot	tr\|Q9M7J9\|POT8_ARATH	0	Potassium transporter 8
trEMBL	tr\|I1N5U5\|I1N5U5_SOYBN	0	Potassium transporter {ECO:0000256\|RuleBase:RU321113}

Sequence

Transcript Sequence

>Glyur001232s00031527.1
NCAAGATTAAAAAAACTAAAAAACAAAACAAAAACAAACACACTCAAAACACAACAAAACCAACCTTCACCACTATCATTCACAGAATCACAAATTCACAACACAACAACAAGCACCTCTCTCTCTCTCTCTCTCTCTCAAACGCGCACACACATTAAAACACACACTTCACCATCCACTCATTATTCTAATCTCCTTTCTCTCTCTCAAAAGCTCCCCCTTCCAACAACAAAACTTTCCTCGTTTCACAGCACCATTCTCAAAACTCACTCGTTGGTTGTGTTTCGTGTTTGTTCTTCTTTTGTCTGCATTTGTCCCTCTTGGGTTGAGCCACTTTCCCCAAAAATACAATCTTTTCATATAATATTATATATTTTAAAAGCCAACAAAAAGAGGGTGGGTGTGTGGGGGAGAAAGAAAAGTAGTAGGTTATATATACTGTACCATTAACAAAGCCACTTTTTGTCCATTAAATTTTTGTTCTTTTTTGTTTTTCATTGACTTGTTGTTTGAACTGGGGAGAGGTTGTTATTGTGTTAATTCATGAGGGGTTAGAGGAATTGAATCCCATCATGGATCTTGAGTCTGTGATCTACAAGAACCCAATTAAGGAAGAATCATGGAAGACAGTGTTGGCTCTGGCTTATCAGAGTTTAGGAGTTGTTTATGGAGACTTAAGCACTTCCCCACTTTACGTTTACAAAAGCACTTTTGCTGAGGACATTCAGCATTCAGATACCAATGAGGAAATCTATGGGGTGTTGTCTTTTGTGTTCTGGACACTCACACTGATTCCACTGCTGAAATATGTGTTCATTGTGCTGAGAGCCGATGACAATGGTGAAGGAGGGACTTTTGCTCTCTATTCCTTGCTTTGTAGGCATGCCAAAGTGAGCCTTTTGCCTAACACTCAGCTTGCAGATGAGGACTTGACACAGTACACAATAGATAATGGAAGAGGAAATGGAACTGTTCCCATCAATAAGAAGAATGTTGGGTCTAGCTTGAAATCCTTGTTGGAGAAACACAGGGTGCTGCAGAGGGTTCTGCTTGTTCTGGCCTTGATTGGGACATGCATGGTTATTGGGGATGGTGTTCTCACACCAGCAATTTCTGTGTTTTCTGCTGTGTCAGGTTTGGAGCTTTCCATGTCTAAAGAGCAGCACCGATATGTGGAGGTTCCAGTTGCTTGTATAATACTGGTTTTTTTATTTGCCCTTCAACATTATGGCACACATCGTGTGGGGTGTCTCTTTGCACCTGTTGTGTTGACCTGGCTGCTATGCATCAGTGCTATAGGTGTTTATAACATCTTGCACTGGAATCCACATGTTTATGAAGCTCTCTCCCCACACTACATGTTCAAATTCCTTAAAAAGACTCAATGGGGAGGATGGATGTCCTTGGGAGGGATTCTACTGTGTATAACAGGCTCAGAAGCTATGTATGCTGATTTAGGACACTTTTCACAGTTGTCTATTAAGATTGCTTTCACCTTCTTGGTATACCCTTCTTTGATCCTAGCATACATGGGACAAGCTGCATATCTTTCAAAGCATCATTCCCTCGAAAGTGACTACCGAATCGGGTTTTATGTTTCTGTACCTGTAAAACTTAGGTGGCCTGTTCTTGCAATAGCCATACTTCAAGCCGTGGTCGGAAGTCAAGCTATCATCACGGGGACTTTCTCGATAATCAAACAATGTTCCGCTTTGGGGTGCTTCCCCAAAGTCAAAATCATTCATACCTCATCCAAGATACATGGCCAGATTTACATTCCTGAGATCAACTGGAGTTTGATGCTGCTTTGCCTGGCTATTACAGTCGGATTTAGAGACACTAAACGCATGGGAAATGCAGCAGGTTTGGCTGTCATAACTGTCATGCTGGTCACAACTTGCCTGATGTCTCTAGTTATAGTCTTATGCTGGCACAAAAGCATTTTGCTAGCTATTTGCTTTCTATTGTTTTTTGGCTCCATTGAGGCACTCTATTTCTCTGCATCCCTCATCAAGTTCCTCGAGGGCGCNTGGGTCCCCATTGCCCTCTCACTTATCTTTCTCATTGCCATGTATGTGTGGCACTATGGCACAATCAAGAAGTATGAGTTTGATGTTGAAAATAAGGTTCCCATCAACTGGCTCCTCAATTTAGGACCCAGTTTAGGAATTGTGAGGGTTAAGGGAATTGGCCTCATACACACTGAGCTTGTATCTGGGATCCCGGCTATTTTCTCTCACTTTGTCACCAATCTGCCTGCTTTTCATCAAGTCGTAATCTTCCTCTGCGTCAAATCTGTCCCAGTACCGCATGTCAGGCCTCAAGAGAGGTTCCTAGTTGGTAGAGTTGGCCCAAAGGAATATAGGCTTTATAGGTGCATAGCGCGGTATGGCTACCGCGATGTTCACAAGGATGACATTGAGTTTGAGAGGGATCTTGTTTGCAGCATAGCTGAATTCATCCGATCCGATACTTCTGAATATGGCTTAGGATTAGGGAGTTTTGAAGACGATACAAAGATGACAGTTGTTGGGACTTCTTCGTCGAACTTGGAGGGTGTAAGGATGTCTGAAGTTGATCGAGAGGATTCTCATCAAATGGNAGGAACTTCTTCAGAGTTGATGGAGGTTAAATCTCCGGAGAAGCCGAAGAAGCGAGTGAGGTTCGTCGTGCCGGACAGTCCACAGATTGATTTGGATGCAAGGGAGGAGTTGCTTGAGCTAATGGAAGCAAAGGAGGCAGGGATGGCATTTATAATGAGTCACTCATATGTGAGAGCTAAAAGAGGATCAAGTTGGATAAAGAAAGTTGTTATCAATTATGGGTATGATTTCTTAAGGAGAAACTCTAGAGGNCCAACTTATGCTTTGAGTATACCTCATGCATCTACCCTAGAGGTTGGCATGATCTATCATGTCTGAGGCTGTGTTTGGATTTCAGTTTGGAGGTCTTGAAACTCANTTTGGCCAACGGAACATGTTAGTTCCTTCGAACAAACTGGGTTATTAGAATTTGTGCAACGTAATTCCANCGGAAATCCAAACATATCCTGAGTTTTGGATATTAGCAATGTCTAGTTTAGTTTTGTAACTAGTGATCTTGTCTGATAGGGTCAACCTTATACATGATAAAATGGTGGCATTTTGTACAGTGACCTTCAAAGCTTCTTGACAAGTAAAATGCTGCCAACCTTTTTTTTTATTTTATTTTGTATTTTTCTTGGTACATAAATAAGGTGTCTCTGTAGGGACTACTTCCCTCAATATCAAGTTCTTTTTCAACCTAGCATGAATCTGAAATGTAGATCATGTTTAAATTTTGAACAGATACTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01232	15023	20862	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0071805 potassium ion transmembrane transport

cellular_component
GO:0016020 membrane

molecular_function
GO:0015079 potassium ion transmembrane transporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001232s00031527.1	PF02705.11	K_trans	24	610	1.20E-190

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	5.975
SRR1783600	control	5.988
SRR1783602	moderate drought stress	9.738
SRR1811619	moderate drought stress	9.491

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	7.165
DRR006520	Root Summer glycyrrhizin high producing strain	7.148
DRR006521	Root Winter glycyrrhizin high producing strain	3.863
DRR006522	Root Winter glycyrrhizin high producing strain	3.779
DRR006523	Root Summer glycyrrhizin low producing strain	4.298
DRR006524	Root Summer glycyrrhizin low producing strain	4.345
DRR006525	Leaf Summer glycyrrhizin high producing strain	16.378
DRR006526	Leaf Summer glycyrrhizin high producing strain	16.406

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	35.853
SRR2868004	Drought Stress (root)	55.016
SRR2967015	Control (root)	57.956

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	10.388
SRR9715740	Leaf	12.137
SRR9715741	Leaf	11.976
SRR9715739	Root	11.452
SRR9715742	Root	20.294
SRR9715743	Root	19.153

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.371
SRR8749028	MeJA induced 9h	1.768
SRR8749029	MeJA induced 9h	0.145
SRR8749030	Uninduced	0.296
SRR8749031	Uninduced	0.115
SRR8749032	Uninduced	0.068

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	28.632
SRR8400027	Control - Root	25.735