Gene detail information of Glyur001231s00040202 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G01360.2 | 5.00E-56 | Family of unknown function (DUF716) |
| NR | AFK46486.1 | 2.86E-137 | unknown [Lotus japonicus] |
| trEMBL | tr|I3T1U4|I3T1U4_LOTJA | 1.00E-137 | Uncharacterized protein {ECO:0000313|EMBL:AFK46486.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01231 | 70213 | 72701 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001231s00040202.1 | PF04819.7 | DUF716 | 96 | 239 | 1.10E-40 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 45.299 |
| SRR1783600 | control | 46.029 |
| SRR1783602 | moderate drought stress | 41.678 |
| SRR1811619 | moderate drought stress | 42.489 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 42.207 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 42.692 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 32.527 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 32.424 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 47.089 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 45.628 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.106 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.495 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 27.032 |
| SRR2868004 | Drought Stress (root) | 32.734 |
| SRR2967015 | Control (root) | 28.896 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 40.939 |
| SRR9715740 | Leaf | 34.076 |
| SRR9715741 | Leaf | 61.712 |
| SRR9715739 | Root | 129.852 |
| SRR9715742 | Root | 98.460 |
| SRR9715743 | Root | 96.051 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 26.259 |
| SRR8749028 | MeJA induced 9h | 23.768 |
| SRR8749029 | MeJA induced 9h | 23.911 |
| SRR8749030 | Uninduced | 20.523 |
| SRR8749031 | Uninduced | 21.371 |
| SRR8749032 | Uninduced | 26.604 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 40.219 |
| SRR8400027 | Control - Root | 43.330 |