Gene detail information of Glyur001230s00027567 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G26640.1 | 3.00E-125 | Amino acid kinase family protein |
| NR | KHN01997.1 | 0 | Hypothetical protein glysoja_034519 [Glycine soja] |
| COG | YP_447889.1 | 3.00E-31 | kinase [Methanosphaera stadtmanae DSM 3091] |
| trEMBL | tr|I1JE95|I1JE95_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G12500.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01230 | 11652 | 21929 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001230s00027567.1 | PF00696.23 | AA_kinase | 24 | 285 | 8.90E-53 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.671 |
| SRR1783600 | control | 5.620 |
| SRR1783602 | moderate drought stress | 7.401 |
| SRR1811619 | moderate drought stress | 7.653 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.123 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.701 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.559 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.419 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.242 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.671 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.700 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.669 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.205 |
| SRR2868004 | Drought Stress (root) | 7.177 |
| SRR2967015 | Control (root) | 8.698 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 20.491 |
| SRR9715740 | Leaf | 21.028 |
| SRR9715741 | Leaf | 25.243 |
| SRR9715739 | Root | 2.443 |
| SRR9715742 | Root | 8.530 |
| SRR9715743 | Root | 6.168 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.055 |
| SRR8749028 | MeJA induced 9h | 6.157 |
| SRR8749029 | MeJA induced 9h | 3.629 |
| SRR8749030 | Uninduced | 0.285 |
| SRR8749031 | Uninduced | 0.195 |
| SRR8749032 | Uninduced | 0.467 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.157 |
| SRR8400027 | Control - Root | 16.169 |