Gene detail information of Glyur001225s00041022 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G01960.1 | 7.00E-10 | |
| NR | XP_004515978.1 | 9.02E-38 | PREDICTED: uncharacterized protein LOC101491971 [Cicer arietinum] |
| trEMBL | tr|A0A072U809|A0A072U809_MEDTR | 1.00E-32 | Uncharacterized protein {ECO:0000313|EMBL:KEH21980.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01225 | 8906 | 9250 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.972 |
| SRR1783600 | control | 3.126 |
| SRR1783602 | moderate drought stress | 0.785 |
| SRR1811619 | moderate drought stress | 0.759 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.513 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.056 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.067 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.399 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.153 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.336 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 55.967 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 53.947 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.943 |
| SRR2868004 | Drought Stress (root) | 22.480 |
| SRR2967015 | Control (root) | 38.469 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.045 |
| SRR9715740 | Leaf | 13.896 |
| SRR9715741 | Leaf | 8.214 |
| SRR9715739 | Root | 0.921 |
| SRR9715742 | Root | 1.306 |
| SRR9715743 | Root | 0.395 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.545 |
| SRR8400027 | Control - Root | 1.456 |